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  5. GSVIVT01016849001

GSVIVT01016849001


Description : Cell wall.pectin.rhamnogalacturonan I.modification and degradation.beta-galactosidase


Gene families : OG0000133 (Archaeplastida) Phylogenetic Tree(s): OG0000133_tree ,
OG_05_0000245 (LandPlants) Phylogenetic Tree(s): OG_05_0000245_tree ,
OG_06_0001808 (SeedPlants) Phylogenetic Tree(s): OG_06_0001808_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016849001
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AT3G13750 BGAL1 beta galactosidase 1 0.06 Archaeplastida
AT5G56870 BGAL4 beta-galactosidase 4 0.05 Archaeplastida
GSVIVT01025170001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 Archaeplastida
MA_14774g0010 No alias beta-galactosidase (BGAL) 0.03 Archaeplastida
MA_217488g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_329922g0010 No alias beta-galactosidase (BGAL) 0.03 Archaeplastida
MA_55965g0010 No alias beta-galactosidase (BGAL) 0.03 Archaeplastida
Solyc02g084720.3.1 No alias beta-galactosidase (BGAL) 0.04 Archaeplastida
Zm00001e013679_P001 No alias Beta-galactosidase 12 OS=Oryza sativa subsp. japonica... 0.01 Archaeplastida
Zm00001e018433_P002 No alias beta-galactosidase (BGAL) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003989 acetyl-CoA carboxylase activity IEP Neighborhood
MF GO:0004089 carbonate dehydratase activity IEP Neighborhood
MF GO:0004096 catalase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
BP GO:0006839 mitochondrial transport IEP Neighborhood
BP GO:0006848 pyruvate transport IEP Neighborhood
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
CC GO:0009317 acetyl-CoA carboxylase complex IEP Neighborhood
BP GO:0015718 monocarboxylic acid transport IEP Neighborhood
MF GO:0016421 CoA carboxylase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0098656 anion transmembrane transport IEP Neighborhood
BP GO:1901475 pyruvate transmembrane transport IEP Neighborhood
BP GO:1903825 organic acid transmembrane transport IEP Neighborhood
BP GO:1905039 carboxylic acid transmembrane transport IEP Neighborhood
BP GO:1990542 mitochondrial transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR031330 Gly_Hdrlase_35_cat 37 341
IPR000922 Lectin_gal-bd_dom 763 840
No external refs found!