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  5. GSVIVT01016867001

GSVIVT01016867001


Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG0000200 (Archaeplastida) Phylogenetic Tree(s): OG0000200_tree ,
OG_05_0000106 (LandPlants) Phylogenetic Tree(s): OG_05_0000106_tree ,
OG_06_0000058 (SeedPlants) Phylogenetic Tree(s): OG_06_0000058_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016867001
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00077430 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AT1G68130 IDD14, AtIDD14 indeterminate(ID)-domain 14 0.05 Archaeplastida
AT2G02080 IDD4, AtIDD4 indeterminate(ID)-domain 4 0.03 Archaeplastida
GSVIVT01020612001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
Gb_01996 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os01g51590.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os02g45054.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os03g13400.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os08g44050.1 No alias C2H2 zinc finger transcription factor 0.07 Archaeplastida
Mp1g15660.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Pp3c1_20230V3.1 No alias indeterminate(ID)-domain 2 0.01 Archaeplastida
Solyc06g062670.3.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc07g053570.4.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e000780_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e000980_P002 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e010628_P002 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e016559_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e027791_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e034898_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e035365_P003 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR022755 Znf_C2H2_jaz 77 99
No external refs found!