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  5. GSVIVT01016956001

GSVIVT01016956001


Description : RNA processing.organelle machineries.RNA splicing.mitochondrial RNA splicing.ABO5 splicing factor


Gene families : OG0010502 (Archaeplastida) Phylogenetic Tree(s): OG0010502_tree ,
OG_05_0010495 (LandPlants) Phylogenetic Tree(s): OG_05_0010495_tree ,
OG_06_0009776 (SeedPlants) Phylogenetic Tree(s): OG_06_0009776_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016956001
Cluster HCCA: Cluster_49


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 438 467
IPR002885 Pentatricopeptide_repeat 226 255
IPR002885 Pentatricopeptide_repeat 332 357
IPR002885 Pentatricopeptide_repeat 404 432
IPR002885 Pentatricopeptide_repeat 259 303
IPR002885 Pentatricopeptide_repeat 540 587
IPR002885 Pentatricopeptide_repeat 470 518
No external refs found!