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  5. GSVIVT01016960001

GSVIVT01016960001


Description : Cytoskeleton.microfilament network.actin polymerisation.profilin actin nucleation protein


Gene families : OG0001070 (Archaeplastida) Phylogenetic Tree(s): OG0001070_tree ,
OG_05_0001188 (LandPlants) Phylogenetic Tree(s): OG_05_0001188_tree ,
OG_06_0001247 (SeedPlants) Phylogenetic Tree(s): OG_06_0001247_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016960001
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AT2G19760 PFN1, PRF1 profilin 1 0.05 Archaeplastida
AT2G19770 PRF5 profilin 5 0.04 Archaeplastida
AT4G29340 PRF4 profilin 4 0.03 Archaeplastida
AT4G29350 PRO2, PFN2, PRF2 profilin 2 0.04 Archaeplastida
Cpa|evm.model.tig00021434.19 No alias Cytoskeleton.microfilament network.actin... 0.01 Archaeplastida
Cre10.g427250 No alias Cytoskeleton.microfilament network.actin... 0.02 Archaeplastida
GSVIVT01015280001 No alias Cytoskeleton.microfilament network.actin... 0.02 Archaeplastida
Gb_11693 No alias profilin actin nucleation protein 0.03 Archaeplastida
LOC_Os06g05880.1 No alias profilin actin nucleation protein 0.05 Archaeplastida
LOC_Os10g17660.1 No alias profilin actin nucleation protein 0.03 Archaeplastida
MA_102655g0010 No alias profilin actin nucleation protein 0.03 Archaeplastida
MA_534242g0010 No alias profilin actin nucleation protein 0.03 Archaeplastida
Mp6g13930.1 No alias profilin actin nucleation protein 0.03 Archaeplastida
Mp8g06710.1 No alias profilin actin nucleation protein 0.06 Archaeplastida
Pp3c18_17930V3.1 No alias profilin 3 0.04 Archaeplastida
Pp3c21_4900V3.1 No alias profilin 4 0.03 Archaeplastida
Solyc08g066110.3.1 No alias profilin actin nucleation protein 0.02 Archaeplastida
Solyc11g070130.2.1 No alias profilin actin nucleation protein 0.07 Archaeplastida
Solyc12g008590.3.1 No alias profilin actin nucleation protein 0.04 Archaeplastida
Zm00001e032207_P001 No alias profilin actin nucleation protein 0.04 Archaeplastida
Zm00001e036481_P001 No alias profilin actin nucleation protein 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004129 cytochrome-c oxidase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005740 mitochondrial envelope IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Neighborhood
CC GO:0008290 F-actin capping protein complex IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
BP GO:0010639 negative regulation of organelle organization IEP Neighborhood
MF GO:0015002 heme-copper terminal oxidase activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Neighborhood
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Neighborhood
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0030832 regulation of actin filament length IEP Neighborhood
BP GO:0030833 regulation of actin filament polymerization IEP Neighborhood
BP GO:0030834 regulation of actin filament depolymerization IEP Neighborhood
BP GO:0030835 negative regulation of actin filament depolymerization IEP Neighborhood
BP GO:0030837 negative regulation of actin filament polymerization IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
BP GO:0031333 negative regulation of protein complex assembly IEP Neighborhood
CC GO:0031967 organelle envelope IEP Neighborhood
CC GO:0031975 envelope IEP Neighborhood
BP GO:0032271 regulation of protein polymerization IEP Neighborhood
BP GO:0032272 negative regulation of protein polymerization IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0032956 regulation of actin cytoskeleton organization IEP Neighborhood
BP GO:0032970 regulation of actin filament-based process IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
CC GO:0033176 proton-transporting V-type ATPase complex IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
BP GO:0043242 negative regulation of protein complex disassembly IEP Neighborhood
BP GO:0043244 regulation of protein complex disassembly IEP Neighborhood
BP GO:0043254 regulation of protein complex assembly IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0044087 regulation of cellular component biogenesis IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044437 vacuolar part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0051016 barbed-end actin filament capping IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051129 negative regulation of cellular component organization IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051493 regulation of cytoskeleton organization IEP Neighborhood
BP GO:0051494 negative regulation of cytoskeleton organization IEP Neighborhood
BP GO:0051693 actin filament capping IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
BP GO:0110053 regulation of actin filament organization IEP Neighborhood
BP GO:0120009 intermembrane lipid transfer IEP Neighborhood
MF GO:0120013 intermembrane lipid transfer activity IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
BP GO:1901879 regulation of protein depolymerization IEP Neighborhood
BP GO:1901880 negative regulation of protein depolymerization IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
BP GO:1902903 regulation of supramolecular fiber organization IEP Neighborhood
BP GO:1902904 negative regulation of supramolecular fiber organization IEP Neighborhood
InterPro domains Description Start Stop
IPR005455 PFN 1 130
No external refs found!