AMTR_s00039p00196100 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00039.160

Description : Auxin-responsive protein IAA13 OS=Arabidopsis thaliana

Gene families : OG0000129 (Archaeplastida) Phylogenetic Tree(s): OG0000129_tree ,
OG_05_0000051 (LandPlants) Phylogenetic Tree(s): OG_05_0000051_tree ,
OG_06_0002729 (SeedPlants) Phylogenetic Tree(s): OG_06_0002729_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00039p00196100
Cluster	HCCA: Cluster_71

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00266860	evm_27.TU.AmTr_v1...	Auxin-induced protein 22D OS=Vigna radiata var. radiata	0.04	Archaeplastida
GSVIVT01035295001	No alias	Phytohormones.auxin.perception and signal...	0.03	Archaeplastida
Gb_13092	No alias	Auxin-responsive protein IAA13 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Gb_36672	No alias	Auxin-responsive protein IAA9 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os06g07040.1	No alias	Auxin-responsive protein IAA20 OS=Oryza sativa subsp....	0.04	Archaeplastida
LOC_Os12g40890.1	No alias	Auxin-responsive protein IAA30 OS=Oryza sativa subsp....	0.02	Archaeplastida
MA_20293g0010	No alias	Auxin-responsive protein IAA7 OS=Oryza sativa subsp....	0.02	Archaeplastida
Zm00001e005073_P001	No alias	Auxin-responsive protein IAA12 OS=Oryza sativa subsp....	0.03	Archaeplastida
Zm00001e012059_P002	No alias	Auxin-responsive protein IAA13 OS=Oryza sativa subsp....	0.02	Archaeplastida
Zm00001e016705_P001	No alias	Auxin-responsive protein IAA1 OS=Oryza sativa subsp....	0.03	Archaeplastida
Zm00001e018053_P002	No alias	Auxin-responsive protein IAA30 OS=Oryza sativa subsp....	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004379	glycylpeptide N-tetradecanoyltransferase activity	IEP	Neighborhood
BP	GO:0006820	anion transport	IEP	Neighborhood
BP	GO:0006835	dicarboxylic acid transport	IEP	Neighborhood
BP	GO:0015711	organic anion transport	IEP	Neighborhood
BP	GO:0015740	C4-dicarboxylate transport	IEP	Neighborhood
BP	GO:0015743	malate transport	IEP	Neighborhood
BP	GO:0015849	organic acid transport	IEP	Neighborhood
MF	GO:0016410	N-acyltransferase activity	IEP	Neighborhood
MF	GO:0019107	myristoyltransferase activity	IEP	Neighborhood
BP	GO:0046942	carboxylic acid transport	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003311	AUX_IAA	35	170

External Links

No external refs found!

AMTR_s00039p00196100 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation