GSVIVT01016998001

Description : Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter

Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0000049 (LandPlants) Phylogenetic Tree(s): OG_05_0000049_tree ,
OG_06_0000052 (SeedPlants) Phylogenetic Tree(s): OG_06_0000052_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01016998001
Cluster	HCCA: Cluster_21

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00029p00242220	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
AMTR_s00122p00085720	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
AT2G26910	PDR4, ATPDR4	pleiotropic drug resistance 4	0.04	Archaeplastida
Cre12.g540650	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
GSVIVT01031380001	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Gb_15493	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Gb_34309	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Gb_34645	No alias	subfamily ABCG transporter	0.04	Archaeplastida
Gb_37007	No alias	subfamily ABCG transporter	0.03	Archaeplastida
LOC_Os01g08260.1	No alias	subfamily ABCG transporter	0.04	Archaeplastida
LOC_Os01g42350.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
LOC_Os11g37700.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
MA_108793g0010	No alias	subfamily ABCG transporter	0.02	Archaeplastida
MA_249533g0010	No alias	ABC transporter G family member 31 OS=Arabidopsis...	0.02	Archaeplastida
Mp1g24380.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Mp1g25350.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Mp2g21800.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Mp4g06670.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Mp8g13070.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Pp3c16_13830V3.1	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.02	Archaeplastida
Pp3c18_21520V3.1	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.03	Archaeplastida
Pp3c19_18700V3.1	No alias	pleiotropic drug resistance 7	0.05	Archaeplastida
Pp3c2_34070V3.1	No alias	pleiotropic drug resistance 3	0.02	Archaeplastida
Pp3c5_23360V3.1	No alias	pleiotropic drug resistance 7	0.04	Archaeplastida
Pp3c5_3240V3.1	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.06	Archaeplastida
Smo115821	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Smo133564	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Smo96758	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Solyc02g081870.4.1	No alias	abscisic acid transporter (ABCG31). subfamily ABCG transporter	0.04	Archaeplastida
Solyc05g018510.3.1	No alias	cuticular lipid exporter (PEC1). subfamily ABCG transporter	0.03	Archaeplastida
Solyc05g053610.2.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Solyc05g055330.3.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Solyc06g065670.4.1	No alias	cuticular lipid exporter (PEC1). subfamily ABCG transporter	0.04	Archaeplastida
Solyc08g067620.2.1	No alias	subfamily ABCG transporter	0.06	Archaeplastida
Solyc11g067000.3.1	No alias	subfamily ABCG transporter	0.05	Archaeplastida
Solyc12g019620.2.1	No alias	subfamily ABCG transporter	0.05	Archaeplastida
Solyc12g019640.2.1	No alias	subfamily ABCG transporter	0.05	Archaeplastida
Solyc12g098210.3.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Zm00001e006460_P001	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Zm00001e020667_P001	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Zm00001e024257_P001	No alias	subfamily ABCG transporter	0.04	Archaeplastida
Zm00001e026148_P001	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Zm00001e030669_P001	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Zm00001e033690_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e037233_P001	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Zm00001e040575_P001	No alias	subfamily ABCG transporter	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004478	methionine adenosyltransferase activity	IEP	Neighborhood
MF	GO:0004506	squalene monooxygenase activity	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0005215	transporter activity	IEP	Neighborhood
CC	GO:0005575	cellular_component	IEP	Neighborhood
CC	GO:0005618	cell wall	IEP	Neighborhood
BP	GO:0005975	carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0006367	transcription initiation from RNA polymerase II promoter	IEP	Neighborhood
BP	GO:0006556	S-adenosylmethionine biosynthetic process	IEP	Neighborhood
BP	GO:0006631	fatty acid metabolic process	IEP	Neighborhood
BP	GO:0006633	fatty acid biosynthetic process	IEP	Neighborhood
BP	GO:0008150	biological_process	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
MF	GO:0008236	serine-type peptidase activity	IEP	Neighborhood
BP	GO:0008610	lipid biosynthetic process	IEP	Neighborhood
BP	GO:0009058	biosynthetic process	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
BP	GO:0016053	organic acid biosynthetic process	IEP	Neighborhood
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Neighborhood
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Neighborhood
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
MF	GO:0016829	lyase activity	IEP	Neighborhood
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Neighborhood
MF	GO:0016843	amine-lyase activity	IEP	Neighborhood
MF	GO:0016844	strictosidine synthase activity	IEP	Neighborhood
MF	GO:0017171	serine hydrolase activity	IEP	Neighborhood
MF	GO:0022857	transmembrane transporter activity	IEP	Neighborhood
CC	GO:0030312	external encapsulating structure	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	Neighborhood
BP	GO:0044255	cellular lipid metabolic process	IEP	Neighborhood
BP	GO:0044283	small molecule biosynthetic process	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Neighborhood
BP	GO:0046500	S-adenosylmethionine metabolic process	IEP	Neighborhood
CC	GO:0048046	apoplast	IEP	Neighborhood
BP	GO:0055085	transmembrane transport	IEP	Neighborhood
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Neighborhood
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR013581	PDR_assoc	730	794
IPR003439	ABC_transporter-like	178	360
IPR013525	ABC_2_trans	514	724
IPR013525	ABC_2_trans	1179	1392
IPR003439	ABC_transporter-like	881	1033

External Links

No external refs found!

GSVIVT01016998001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation