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  5. GSVIVT01016999001

GSVIVT01016999001


Description : Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter


Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0000049 (LandPlants) Phylogenetic Tree(s): OG_05_0000049_tree ,
OG_06_0000052 (SeedPlants) Phylogenetic Tree(s): OG_06_0000052_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016999001
Cluster HCCA: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00162220 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AMTR_s00069p00191700 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.04 Archaeplastida
AT2G36380 PDR6, ATPDR6 pleiotropic drug resistance 6 0.04 Archaeplastida
AT4G15233 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.03 Archaeplastida
Cpa|evm.model.tig00000057.108 No alias ABC transporter G family member 35 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01017201001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Gb_05443 No alias subfamily ABCG transporter 0.02 Archaeplastida
Gb_37007 No alias subfamily ABCG transporter 0.03 Archaeplastida
LOC_Os01g52560.1 No alias subfamily ABCG transporter 0.05 Archaeplastida
LOC_Os07g33780.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
LOC_Os08g29570.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
MA_10427683g0010 No alias subfamily ABCG transporter 0.03 Archaeplastida
MA_10433422g0010 No alias subfamily ABCG transporter 0.03 Archaeplastida
MA_10437197g0020 No alias subfamily ABCG transporter 0.03 Archaeplastida
MA_249533g0010 No alias ABC transporter G family member 31 OS=Arabidopsis... 0.03 Archaeplastida
MA_525120g0010 No alias ABC transporter G family member 51 OS=Oryza sativa... 0.04 Archaeplastida
MA_954551g0010 No alias subfamily ABCG transporter 0.04 Archaeplastida
Mp4g06670.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Pp3c14_11830V3.1 No alias pleiotropic drug resistance 7 0.03 Archaeplastida
Pp3c19_18700V3.1 No alias pleiotropic drug resistance 7 0.02 Archaeplastida
Smo133564 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Smo441720 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
Solyc08g067610.3.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Solyc09g091660.3.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Solyc09g091670.3.1 No alias subfamily ABCG transporter 0.08 Archaeplastida
Solyc12g098210.3.1 No alias subfamily ABCG transporter 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0008037 cell recognition IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 517 729
IPR013525 ABC_2_trans 1217 1430
IPR013581 PDR_assoc 734 797
IPR003439 ABC_transporter-like 919 1071
IPR003439 ABC_transporter-like 181 363
IPR029481 ABC_trans_N 79 156
No external refs found!