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  5. GSVIVT01017072001

GSVIVT01017072001


Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS17 component


Gene families : OG0001873 (Archaeplastida) Phylogenetic Tree(s): OG0001873_tree ,
OG_05_0008425 (LandPlants) Phylogenetic Tree(s): OG_05_0008425_tree ,
OG_06_0009671 (SeedPlants) Phylogenetic Tree(s): OG_06_0009671_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017072001
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00201470 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.04 Archaeplastida
AT1G79850 RPS17, CS17, PRPS17 ribosomal protein S17 0.06 Archaeplastida
AT3G18880 No alias Nucleic acid-binding, OB-fold-like protein 0.03 Archaeplastida
Gb_07769 No alias component psRPS17 of small ribosomal subunit proteome 0.04 Archaeplastida
Mp5g05080.1 No alias component psRPS17 of small ribosomal subunit proteome 0.04 Archaeplastida
Pp3c11_14630V3.1 No alias ribosomal protein S17 0.04 Archaeplastida
Smo59743 No alias Protein biosynthesis.organelle translation... 0.02 Archaeplastida
Solyc03g120630.4.1 No alias component psRPS17 of small ribosomal subunit proteome 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009538 photosystem I reaction center IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR000266 Ribosomal_S17/S11 96 160
No external refs found!