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  5. GSVIVT01017081001

GSVIVT01017081001


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL37 component


Gene families : OG0002317 (Archaeplastida) Phylogenetic Tree(s): OG0002317_tree ,
OG_05_0002166 (LandPlants) Phylogenetic Tree(s): OG_05_0002166_tree ,
OG_06_0002211 (SeedPlants) Phylogenetic Tree(s): OG_06_0002211_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017081001
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00029660 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.17 Archaeplastida
AT1G15250 No alias Zinc-binding ribosomal protein family protein 0.05 Archaeplastida
AT1G52300 No alias Zinc-binding ribosomal protein family protein 0.39 Archaeplastida
AT3G16080 No alias Zinc-binding ribosomal protein family protein 0.4 Archaeplastida
Cpa|evm.model.tig00020610.80 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.13 Archaeplastida
Cre10.g430400 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.39 Archaeplastida
Gb_29003 No alias component RPL37 of LSU proteome component 0.25 Archaeplastida
Gb_33514 No alias component RPL37 of LSU proteome component 0.15 Archaeplastida
LOC_Os02g56990.1 No alias component RPL37 of LSU proteome component 0.22 Archaeplastida
LOC_Os08g03450.1 No alias component RPL37 of LSU proteome component 0.16 Archaeplastida
MA_129829g0010 No alias component RPL37 of LSU proteome component 0.08 Archaeplastida
MA_741492g0010 No alias component RPL37 of LSU proteome component 0.05 Archaeplastida
Mp2g12400.1 No alias component RPL37 of LSU proteome component 0.15 Archaeplastida
Pp3c15_4370V3.1 No alias Zinc-binding ribosomal protein family protein 0.1 Archaeplastida
Pp3c18_13160V3.1 No alias Zinc-binding ribosomal protein family protein 0.44 Archaeplastida
Pp3c20_2550V3.1 No alias Zinc-binding ribosomal protein family protein 0.27 Archaeplastida
Pp3c21_9910V3.1 No alias Zinc-binding ribosomal protein family protein 0.2 Archaeplastida
Pp3c23_17260V3.1 No alias Zinc-binding ribosomal protein family protein 0.26 Archaeplastida
Pp3c9_8500V3.1 No alias Zinc-binding ribosomal protein family protein 0.17 Archaeplastida
Solyc03g120780.3.1 No alias component RPL37 of LSU proteome component 0.11 Archaeplastida
Solyc06g066660.4.1 No alias component RPL37 of LSU proteome component 0.19 Archaeplastida
Solyc08g068180.3.1 No alias component RPL37 of LSU proteome component 0.04 Archaeplastida
Zm00001e001908_P001 No alias component RPL37 of LSU proteome component 0.21 Archaeplastida
Zm00001e013434_P001 No alias component RPL37 of LSU proteome component 0.3 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0008097 5S rRNA binding IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR001569 Ribosomal_L37e 23 73
No external refs found!