Aliases : evm_27.TU.AmTr_v1.0_scaffold00039.174
Description : RNA processing.ribonuclease activities.RNase P ribonuclease activities.RNA-dependent RNase P complex.RPP30/POP2 component
Gene families : OG0006115 (Archaeplastida) Phylogenetic Tree(s): OG0006115_tree ,
OG_05_0008606 (LandPlants) Phylogenetic Tree(s): OG_05_0008606_tree ,
OG_06_0007854 (SeedPlants) Phylogenetic Tree(s): OG_06_0007854_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AMTR_s00039p00206760 | |
Cluster | HCCA: Cluster_196 |
Target | Alias | Description | ECC score | Gene Family Method | Actions | |
---|---|---|---|---|---|---|
AT5G59980 | No alias | Polymerase/histidinol phosphatase-like | 0.03 | Archaeplastida | ||
Mp4g18130.1 | No alias | component RPP30/POP2 of RNA-dependent RNase P complex | 0.02 | Archaeplastida | ||
Pp3c23_18130V3.1 | No alias | Polymerase/histidinol phosphatase-like | 0.03 | Archaeplastida | ||
0.0Solyc06g005200.3.1 | No alias | component RPP30/POP2 of RNA-dependent RNase P complex | 0.02 | Archaeplastida | ||
Zm00001e020804_P002 | No alias | component RPP30/POP2 of RNA-dependent RNase P complex | 0.05 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004540 | ribonuclease activity | IEA | Interproscan |
BP | GO:0008033 | tRNA processing | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000226 | microtubule cytoskeleton organization | IEP | Neighborhood |
CC | GO:0000922 | spindle pole | IEP | Neighborhood |
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
MF | GO:0003964 | RNA-directed DNA polymerase activity | IEP | Neighborhood |
MF | GO:0004484 | mRNA guanylyltransferase activity | IEP | Neighborhood |
MF | GO:0004612 | phosphoenolpyruvate carboxykinase (ATP) activity | IEP | Neighborhood |
MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Neighborhood |
MF | GO:0004828 | serine-tRNA ligase activity | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
CC | GO:0005815 | microtubule organizing center | IEP | Neighborhood |
BP | GO:0006278 | RNA-dependent DNA biosynthetic process | IEP | Neighborhood |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Neighborhood |
BP | GO:0006370 | 7-methylguanosine mRNA capping | IEP | Neighborhood |
BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
BP | GO:0006434 | seryl-tRNA aminoacylation | IEP | Neighborhood |
BP | GO:0006470 | protein dephosphorylation | IEP | Neighborhood |
BP | GO:0006996 | organelle organization | IEP | Neighborhood |
BP | GO:0007010 | cytoskeleton organization | IEP | Neighborhood |
BP | GO:0007017 | microtubule-based process | IEP | Neighborhood |
MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Neighborhood |
MF | GO:0008192 | RNA guanylyltransferase activity | IEP | Neighborhood |
MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
BP | GO:0009452 | 7-methylguanosine RNA capping | IEP | Neighborhood |
BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
BP | GO:0016311 | dephosphorylation | IEP | Neighborhood |
CC | GO:0016592 | mediator complex | IEP | Neighborhood |
MF | GO:0016763 | transferase activity, transferring pentosyl groups | IEP | Neighborhood |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | Neighborhood |
CC | GO:0030684 | preribosome | IEP | Neighborhood |
CC | GO:0032040 | small-subunit processome | IEP | Neighborhood |
MF | GO:0034061 | DNA polymerase activity | IEP | Neighborhood |
BP | GO:0036260 | RNA capping | IEP | Neighborhood |
CC | GO:0044422 | organelle part | IEP | Neighborhood |
CC | GO:0044430 | cytoskeletal part | IEP | Neighborhood |
CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
MF | GO:0070568 | guanylyltransferase activity | IEP | Neighborhood |
BP | GO:0071897 | DNA biosynthetic process | IEP | Neighborhood |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002738 | RNase_P_p30 | 102 | 252 |
No external refs found! |