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  5. GSVIVT01017188001

GSVIVT01017188001


Description : Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter


Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0000049 (LandPlants) Phylogenetic Tree(s): OG_05_0000049_tree ,
OG_06_0000052 (SeedPlants) Phylogenetic Tree(s): OG_06_0000052_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017188001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00224800 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 Archaeplastida
LOC_Os02g21340.1 No alias subfamily ABCG transporter 0.01 Archaeplastida
LOC_Os09g16449.1 No alias subfamily ABCG transporter 0.01 Archaeplastida
LOC_Os11g37700.1 No alias subfamily ABCG transporter 0.04 Archaeplastida
MA_10429200g0010 No alias ABC transporter G family member 34 OS=Arabidopsis... 0.02 Archaeplastida
Smo181756 No alias Solute transport.primary active transport.ABC... 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 698 908
IPR013525 ABC_2_trans 1373 1587
IPR003439 ABC_transporter-like 1076 1228
IPR003439 ABC_transporter-like 382 564
IPR013581 PDR_assoc 913 977
IPR029481 ABC_trans_N 287 356
No external refs found!