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  5. GSVIVT01017202001

GSVIVT01017202001


Description : Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter


Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0000049 (LandPlants) Phylogenetic Tree(s): OG_05_0000049_tree ,
OG_06_0000052 (SeedPlants) Phylogenetic Tree(s): OG_06_0000052_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017202001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00117010 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Cre04.g224500 No alias Solute transport.primary active transport.ABC... 0.01 Archaeplastida
GSVIVT01017187001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
GSVIVT01017198001 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
Gb_33043 No alias subfamily ABCG transporter 0.03 Archaeplastida
Gb_34645 No alias subfamily ABCG transporter 0.03 Archaeplastida
LOC_Os02g32690.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
MA_124091g0010 No alias subfamily ABCG transporter 0.03 Archaeplastida
MA_124298g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_18770g0010 No alias subfamily ABCG transporter 0.04 Archaeplastida
Mp1g25350.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Mp8g13070.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Pp3c19_17390V3.1 No alias pleiotropic drug resistance 1 0.11 Archaeplastida
Pp3c2_34070V3.1 No alias pleiotropic drug resistance 3 0.01 Archaeplastida
Pp3c5_3240V3.1 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.02 Archaeplastida
Smo235359 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
Smo412699 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Solyc05g018510.3.1 No alias cuticular lipid exporter (PEC1). subfamily ABCG transporter 0.04 Archaeplastida
Solyc05g053610.2.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Solyc06g065670.4.1 No alias cuticular lipid exporter (PEC1). subfamily ABCG transporter 0.05 Archaeplastida
Solyc11g067000.3.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Zm00001e020666_P001 No alias subfamily ABCG transporter 0.03 Archaeplastida
Zm00001e026148_P001 No alias subfamily ABCG transporter 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 168 350
IPR013525 ABC_2_trans 1178 1392
IPR013525 ABC_2_trans 506 716
IPR029481 ABC_trans_N 75 142
IPR003439 ABC_transporter-like 881 1033
IPR013581 PDR_assoc 721 785
No external refs found!