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  5. GSVIVT01017210001

GSVIVT01017210001


Description : Coleoptile phototropism protein 1 OS=Oryza sativa subsp. japonica


Gene families : OG0000044 (Archaeplastida) Phylogenetic Tree(s): OG0000044_tree ,
OG_05_0007350 (LandPlants) Phylogenetic Tree(s): OG_05_0007350_tree ,
OG_06_0004637 (SeedPlants) Phylogenetic Tree(s): OG_06_0004637_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017210001
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00155420 evm_27.TU.AmTr_v1... Root phototropism protein 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00122p00139490 evm_27.TU.AmTr_v1... Root phototropism protein 3 OS=Arabidopsis thaliana 0.06 Archaeplastida
AT3G08660 No alias Phototropic-responsive NPH3 family protein 0.04 Archaeplastida
AT3G15570 No alias Phototropic-responsive NPH3 family protein 0.06 Archaeplastida
AT5G10250 DOT3 Phototropic-responsive NPH3 family protein 0.04 Archaeplastida
Gb_07556 No alias BTB/POZ domain-containing protein At1g30440... 0.04 Archaeplastida
Gb_31331 No alias BTB/POZ domain-containing protein At1g30440... 0.03 Archaeplastida
LOC_Os03g52880.1 No alias BTB/POZ domain-containing protein At5g66560... 0.03 Archaeplastida
MA_10429476g0010 No alias BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.03 Archaeplastida
MA_10592g0020 No alias BTB/POZ domain-containing protein At5g48130... 0.04 Archaeplastida
MA_26192g0010 No alias BTB/POZ domain-containing protein At5g48130... 0.04 Archaeplastida
MA_9526427g0010 No alias no hits & (original description: none) 0.08 Archaeplastida
Pp3c3_34180V3.1 No alias Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
Smo141980 No alias BTB/POZ domain-containing protein At5g48800... 0.06 Archaeplastida
Solyc01g098820.3.1 No alias Coleoptile phototropism protein 1 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Solyc03g044090.4.1 No alias BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e003063_P004 No alias BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e011959_P001 No alias BTB/POZ domain-containing protein At5g66560... 0.03 Archaeplastida
Zm00001e039269_P001 No alias BTB/POZ domain-containing protein At3g08570... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0008883 glutamyl-tRNA reductase activity IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0050661 NADP binding IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
InterPro domains Description Start Stop
IPR027356 NPH3_dom 23 269
No external refs found!