1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01017232001

GSVIVT01017232001


Description : Disease resistance protein SUMM2 OS=Arabidopsis thaliana


Gene families : OG0000053 (Archaeplastida) Phylogenetic Tree(s): OG0000053_tree ,
OG_05_0000018 (LandPlants) Phylogenetic Tree(s): OG_05_0000018_tree ,
OG_06_0000005 (SeedPlants) Phylogenetic Tree(s): OG_06_0000005_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017232001
Cluster HCCA: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00088510 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00050p00210650 evm_27.TU.AmTr_v1... Putative disease resistance protein At1g63350... 0.03 Archaeplastida
AT1G12210 RFL1 RPS5-like 1 0.04 Archaeplastida
AT1G12220 RPS5 Disease resistance protein (CC-NBS-LRR class) family 0.05 Archaeplastida
AT1G12290 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 Archaeplastida
AT1G61310 No alias LRR and NB-ARC domains-containing disease resistance protein 0.06 Archaeplastida
AT5G43730 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 Archaeplastida
GSVIVT01014595001 No alias Disease resistance protein At4g27190 OS=Arabidopsis thaliana 0.07 Archaeplastida
GSVIVT01017023001 No alias Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01017136001 No alias Probable disease resistance protein At1g61190... 0.06 Archaeplastida
GSVIVT01017142001 No alias Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01017143001 No alias Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01017148001 No alias Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01017149001 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01017225001 No alias Probable disease resistance protein At1g12290... 0.07 Archaeplastida
GSVIVT01034252001 No alias Probable disease resistance protein At1g61300... 0.03 Archaeplastida
GSVIVT01038391001 No alias Probable disease resistance protein At1g12290... 0.04 Archaeplastida
GSVIVT01038446001 No alias Probable disease resistance protein At1g52660... 0.03 Archaeplastida
LOC_Os01g57870.1 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10265639g0010 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_10436967g0010 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_162415g0010 No alias Probable disease resistance protein At1g61310... 0.03 Archaeplastida
MA_834155g0010 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 1 218
No external refs found!