GSVIVT01017315001


Description : Cell wall.cutin and suberin.biosynthesis regulation.SHN-type transcription factor


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0003909 (SeedPlants) Phylogenetic Tree(s): OG_06_0003909_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017315001
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00268560 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00010p00194910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00010p00240320 evm_27.TU.AmTr_v1... Ethylene-responsive transcription factor FZP OS=Oryza... 0.04 Archaeplastida
AMTR_s00025p00249140 evm_27.TU.AmTr_v1... Cell wall.cutin and suberin.biosynthesis... 0.06 Archaeplastida
AMTR_s00040p00180260 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00049p00214620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
AMTR_s00058p00066390 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.04 Archaeplastida
AMTR_s00069p00132820 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.03 Archaeplastida
AMTR_s00077p00141890 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
AMTR_s00099p00029210 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00107p00095070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AT1G01250 No alias Integrase-type DNA-binding superfamily protein 0.05 Archaeplastida
AT1G12890 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT1G15360 WIN1, SHN1 Integrase-type DNA-binding superfamily protein 0.08 Archaeplastida
AT1G28160 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G64380 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G77200 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT2G44840 ATERF13, ERF13, EREBP ethylene-responsive element binding factor 13 0.03 Archaeplastida
AT3G57600 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT4G11140 CRF1 cytokinin response factor 1 0.05 Archaeplastida
AT5G50080 ERF110 ethylene response factor 110 0.02 Archaeplastida
Cre14.g620500 No alias No description available 0.02 Archaeplastida
GSVIVT01005747001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01018270001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01018271001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01028313001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01033793001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.06 Archaeplastida
Gb_03783 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_09495 No alias transcription factor (ERF). transcription factor (ERN1) 0.03 Archaeplastida
Gb_37188 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_41294 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_41836 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os02g10760.1 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.03 Archaeplastida
LOC_Os02g32040.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os02g38090.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os02g43790.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os02g55380.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os03g08470.1 No alias Ethylene-responsive transcription factor 1 OS=Oryza... 0.05 Archaeplastida
LOC_Os05g28350.1 No alias transcription factor (DREB) 0.02 Archaeplastida
LOC_Os05g39590.3 No alias Dehydration-responsive element-binding protein 2D... 0.04 Archaeplastida
LOC_Os05g49010.1 No alias transcription factor (ERF) 0.04 Archaeplastida
LOC_Os06g08340.1 No alias transcription factor (ERF) 0.04 Archaeplastida
LOC_Os06g40150.1 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.07 Archaeplastida
LOC_Os07g47330.1 No alias transcription factor (ERF) 0.04 Archaeplastida
LOC_Os07g47790.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os08g41030.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g13840.1 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_100577g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_10430231g0010 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.04 Archaeplastida
MA_132427g0010 No alias transcription factor (ERF) 0.04 Archaeplastida
MA_137148g0010 No alias transcription factor (ERF) 0.04 Archaeplastida
MA_179692g0020 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_214063g0010 No alias transcription factor (DREB) 0.04 Archaeplastida
MA_3758g0010 No alias Ethylene-responsive transcription factor ERF013... 0.05 Archaeplastida
MA_40048g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_411387g0010 No alias transcription factor (ERF) 0.04 Archaeplastida
MA_47696g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_500288g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_54341g0010 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.06 Archaeplastida
MA_647924g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_66442g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_7850076g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_83118g0010 No alias transcription factor (DREB) 0.04 Archaeplastida
MA_8384767g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_914123g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_9160409g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_99821g0010 No alias transcription factor (ERF) 0.05 Archaeplastida
Pp3c10_17870V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c11_24520V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c5_880V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c6_20480V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Solyc01g067540.2.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc03g116610.3.1 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.03 Archaeplastida
Solyc03g117230.1.1 No alias Ethylene-responsive transcription factor ERF084... 0.03 Archaeplastida
Solyc05g050790.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc05g050830.3.1 No alias transcription factor (DREB) 0.06 Archaeplastida
Solyc06g051840.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc06g063070.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc06g066540.1.1 No alias transcription factor (DREB) 0.06 Archaeplastida
Solyc06g068360.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc12g056980.1.1 No alias transcription factor (DREB) 0.04 Archaeplastida
Zm00001e000689_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e003579_P001 No alias Ethylene-responsive transcription factor ERF015... 0.03 Archaeplastida
Zm00001e006692_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e007350_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e014008_P002 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.04 Archaeplastida
Zm00001e014415_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e018522_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e019026_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e022864_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e032032_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e033072_P001 No alias transcription factor (ERF). transcription factor (ERN1) 0.04 Archaeplastida
Zm00001e035811_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e036130_P001 No alias transcription factor (DREB) 0.04 Archaeplastida
Zm00001e036201_P001 No alias Ethylene-responsive transcription factor ERF014... 0.02 Archaeplastida
Zm00001e037404_P001 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEP Neighborhood
MF GO:0004506 squalene monooxygenase activity IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
CC GO:0005751 mitochondrial respiratory chain complex IV IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0015002 heme-copper terminal oxidase activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Neighborhood
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0045277 respiratory chain complex IV IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
CC GO:0070069 cytochrome complex IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
CC GO:0098803 respiratory chain complex IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 6 54
No external refs found!