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  5. AMTR_s00039p00215960

AMTR_s00039p00215960 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00039.187

Description : Phytohormones.auxin.synthesis.indole-3-pyruvic acid (IPyA) pathway.YUCCA-type flavin monooxygenase


Gene families : OG0000270 (Archaeplastida) Phylogenetic Tree(s): OG0000270_tree ,
OG_05_0000455 (LandPlants) Phylogenetic Tree(s): OG_05_0000455_tree ,
OG_06_0000378 (SeedPlants) Phylogenetic Tree(s): OG_06_0000378_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00039p00215960
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AMTR_s01333p00002250 evm_27.TU.AmTr_v1... Phytohormones.auxin.synthesis.indole-3-pyruvic acid... 0.02 Archaeplastida
AT1G04180 YUC9 YUCCA 9 0.07 Archaeplastida
AT4G28720 YUC8 Flavin-binding monooxygenase family protein 0.04 Archaeplastida
GSVIVT01009989001 No alias Phytohormones.auxin.synthesis.indole-3-pyruvic acid... 0.02 Archaeplastida
LOC_Os01g16714.1 No alias flavin monooxygenase (YUCCA) 0.02 Archaeplastida
LOC_Os04g03980.1 No alias flavin monooxygenase (YUCCA) 0.04 Archaeplastida
LOC_Os07g25540.1 No alias flavin monooxygenase (YUCCA) 0.05 Archaeplastida
MA_215174g0010 No alias flavin monooxygenase (YUCCA) 0.03 Archaeplastida
Zm00001e008767_P001 No alias flavin monooxygenase (YUCCA) 0.04 Archaeplastida
Zm00001e009691_P002 No alias flavin monooxygenase (YUCCA) 0.01 Archaeplastida
Zm00001e020334_P001 No alias flavin monooxygenase (YUCCA) 0.05 Archaeplastida
Zm00001e040571_P001 No alias flavin monooxygenase (YUCCA) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
MF GO:0050661 NADP binding IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004356 glutamate-ammonia ligase activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006541 glutamine metabolic process IEP Neighborhood
BP GO:0006542 glutamine biosynthetic process IEP Neighborhood
BP GO:0006855 drug transmembrane transport IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0009064 glutamine family amino acid metabolic process IEP Neighborhood
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015238 drug transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
BP GO:0015893 drug transport IEP Neighborhood
MF GO:0016211 ammonia ligase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Neighborhood
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR020946 Flavin_mOase-like 21 329
No external refs found!