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  5. GSVIVT01017364001

GSVIVT01017364001


Description : Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica


Gene families : OG0000871 (Archaeplastida) Phylogenetic Tree(s): OG0000871_tree ,
OG_05_0001051 (LandPlants) Phylogenetic Tree(s): OG_05_0001051_tree ,
OG_06_0000904 (SeedPlants) Phylogenetic Tree(s): OG_06_0000904_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017364001
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
Solyc08g075140.1.1 No alias Zinc finger BED domain-containing protein RICESLEEPER 1... 0.03 Archaeplastida
Solyc10g007470.4.1 No alias Zinc finger BED domain-containing protein RICESLEEPER 1... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR025525 hAT-like_transposase_RNase-H 26 124
IPR008906 HATC_C_dom 194 276
No external refs found!