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  5. GSVIVT01017368001

GSVIVT01017368001


Description : RNA biosynthesis.transcriptional activation.FAR1 transcription factor


Gene families : OG0000638 (Archaeplastida) Phylogenetic Tree(s): OG0000638_tree ,
OG_05_0000359 (LandPlants) Phylogenetic Tree(s): OG_05_0000359_tree ,
OG_06_0000420 (SeedPlants) Phylogenetic Tree(s): OG_06_0000420_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017368001
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
AT4G19990 FRS1 FAR1-related sequence 1 0.03 Archaeplastida
LOC_Os03g50900.1 No alias transcription factor (FAR1) 0.04 Archaeplastida
Solyc06g068210.3.1 No alias transcription factor (FAR1) 0.04 Archaeplastida
Solyc08g060840.1.1 No alias transcription factor (FAR1). FRS-type red/far-red light... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009411 response to UV IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
CC GO:1902554 serine/threonine protein kinase complex IEP Neighborhood
CC GO:1902911 protein kinase complex IEP Neighborhood
CC GO:1990316 Atg1/ULK1 kinase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR007527 Znf_SWIM 644 664
IPR018289 MULE_transposase_dom 345 439
IPR004330 FAR1_DNA_bnd_dom 143 226
No external refs found!