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  5. GSVIVT01017449001

GSVIVT01017449001


Description : Protein SRG1 OS=Arabidopsis thaliana


Gene families : OG0000036 (Archaeplastida) Phylogenetic Tree(s): OG0000036_tree ,
OG_05_0001434 (LandPlants) Phylogenetic Tree(s): OG_05_0001434_tree ,
OG_06_0000751 (SeedPlants) Phylogenetic Tree(s): OG_06_0000751_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017449001
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00194820 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.14... 0.04 Archaeplastida
AT1G17020 SRG1, ATSRG1 senescence-related gene 1 0.04 Archaeplastida
AT3G47190 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.02 Archaeplastida
Gb_18191 No alias Protein SRG1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10427811g0010 No alias oxidoreductase (LBO) 0.03 Archaeplastida
MA_496205g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp3g16920.1 No alias Probable 2-oxoglutarate-dependent dioxygenase ANS... 0.03 Archaeplastida
Mp3g19390.1 No alias Flavanone 3-dioxygenase OS=Petroselinum crispum... 0.02 Archaeplastida
Smo90714 No alias Protein SRG1 OS=Arabidopsis thaliana 0.04 Archaeplastida
Solyc02g071430.3.1 No alias Protein SRG1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e036356_P001 No alias Protein SRG1 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0004888 transmembrane signaling receptor activity IEP Neighborhood
MF GO:0004970 ionotropic glutamate receptor activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006825 copper ion transport IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
MF GO:0008066 glutamate receptor activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
MF GO:0022824 transmitter-gated ion channel activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022835 transmitter-gated channel activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0030594 neurotransmitter receptor activity IEP Neighborhood
BP GO:0035434 copper ion transmembrane transport IEP Neighborhood
MF GO:0038023 signaling receptor activity IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
BP GO:0120009 intermembrane lipid transfer IEP Neighborhood
MF GO:0120013 intermembrane lipid transfer activity IEP Neighborhood
InterPro domains Description Start Stop
IPR026992 DIOX_N 49 160
IPR005123 Oxoglu/Fe-dep_dioxygenase 211 305
No external refs found!