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  5. AMTR_s00039p00224920

AMTR_s00039p00224920 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00039.205

Description : Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter


Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0000049 (LandPlants) Phylogenetic Tree(s): OG_05_0000049_tree ,
OG_06_0000052 (SeedPlants) Phylogenetic Tree(s): OG_06_0000052_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00039p00224920
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Cre09.g395750 No alias Solute transport.primary active transport.ABC... 0.01 Archaeplastida
GSVIVT01017196001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
GSVIVT01017204001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
GSVIVT01036184001 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Gb_34309 No alias subfamily ABCG transporter 0.02 Archaeplastida
Gb_34310 No alias ABC transporter G family member 31 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os01g42410.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
LOC_Os08g29570.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
MA_10427561g0010 No alias subfamily ABCG transporter 0.02 Archaeplastida
MA_135152g0010 No alias subfamily ABCG transporter 0.03 Archaeplastida
Mp2g21800.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Pp3c14_11830V3.1 No alias pleiotropic drug resistance 7 0.03 Archaeplastida
Pp3c16_13830V3.1 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.02 Archaeplastida
Pp3c19_18700V3.1 No alias pleiotropic drug resistance 7 0.02 Archaeplastida
Pp3c22_9340V3.1 No alias pleiotropic drug resistance 12 0.02 Archaeplastida
Solyc06g065670.4.1 No alias cuticular lipid exporter (PEC1). subfamily ABCG transporter 0.04 Archaeplastida
Zm00001e006460_P001 No alias subfamily ABCG transporter 0.02 Archaeplastida
Zm00001e020667_P001 No alias subfamily ABCG transporter 0.02 Archaeplastida
Zm00001e030669_P001 No alias subfamily ABCG transporter 0.02 Archaeplastida
Zm00001e037233_P001 No alias subfamily ABCG transporter 0.02 Archaeplastida
Zm00001e040575_P001 No alias subfamily ABCG transporter 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0004152 dihydroorotate dehydrogenase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Neighborhood
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Neighborhood
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Neighborhood
BP GO:0006222 UMP biosynthetic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
BP GO:0009119 ribonucleoside metabolic process IEP Neighborhood
BP GO:0009129 pyrimidine nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009130 pyrimidine nucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009163 nucleoside biosynthetic process IEP Neighborhood
BP GO:0009173 pyrimidine ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009174 pyrimidine ribonucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009218 pyrimidine ribonucleotide metabolic process IEP Neighborhood
BP GO:0009220 pyrimidine ribonucleotide biosynthetic process IEP Neighborhood
MF GO:0016635 oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
BP GO:0042455 ribonucleoside biosynthetic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
BP GO:0046049 UMP metabolic process IEP Neighborhood
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Neighborhood
BP GO:0046132 pyrimidine ribonucleoside biosynthetic process IEP Neighborhood
BP GO:0046134 pyrimidine nucleoside biosynthetic process IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Neighborhood
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Neighborhood
BP GO:1901659 glycosyl compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013581 PDR_assoc 733 796
IPR003439 ABC_transporter-like 883 1011
IPR013525 ABC_2_trans 517 728
IPR013525 ABC_2_trans 1222 1333
No external refs found!