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  5. GSVIVT01017639001

GSVIVT01017639001


Description : RNA biosynthesis.transcriptional activation.DBP transcription factor


Gene families : OG0000802 (Archaeplastida) Phylogenetic Tree(s): OG0000802_tree ,
OG_05_0009795 (LandPlants) Phylogenetic Tree(s): OG_05_0009795_tree ,
OG_06_0007014 (SeedPlants) Phylogenetic Tree(s): OG_06_0007014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017639001
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g19130.1 No alias transcription factor (DBP) 0.09 Archaeplastida
LOC_Os05g04360.1 No alias transcription factor (DBP) 0.06 Archaeplastida
MA_13571g0010 No alias transcription factor (DBP). clade G phosphatase 0.02 Archaeplastida
Solyc01g068000.4.1 No alias transcription factor (DBP) 0.03 Archaeplastida
Solyc05g053290.3.1 No alias transcription factor (DBP) 0.03 Archaeplastida
Solyc06g009390.3.1 No alias transcription factor (DBP) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Neighborhood
CC GO:0036452 ESCRT complex IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044440 endosomal part IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0071985 multivesicular body sorting pathway IEP Neighborhood
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 56 309
No external refs found!