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  5. GSVIVT01017670001

GSVIVT01017670001


Description : RNA biosynthesis.transcriptional activation.CAMTA transcription factor


Gene families : OG0000551 (Archaeplastida) Phylogenetic Tree(s): OG0000551_tree ,
OG_05_0000809 (LandPlants) Phylogenetic Tree(s): OG_05_0000809_tree ,
OG_06_0001322 (SeedPlants) Phylogenetic Tree(s): OG_06_0001322_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017670001
Cluster HCCA: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00173360 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.CAMTA... 0.02 Archaeplastida
AT4G16150 No alias calmodulin binding;transcription regulators 0.03 Archaeplastida
Gb_35291 No alias transcription factor (CAMTA) 0.06 Archaeplastida
LOC_Os01g69910.1 No alias transcription factor (CAMTA) 0.03 Archaeplastida
LOC_Os04g31900.1 No alias transcription factor (CAMTA) 0.09 Archaeplastida
LOC_Os10g22950.1 No alias transcription factor (CAMTA) 0.07 Archaeplastida
Zm00001e033909_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e035585_P001 No alias transcription factor (CAMTA) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 879 898
IPR000048 IQ_motif_EF-hand-BS 855 874
IPR005559 CG-1_dom 21 134
IPR002909 IPT_dom 446 532
No external refs found!