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  5. GSVIVT01017676001

GSVIVT01017676001


Description : Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter


Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0000049 (LandPlants) Phylogenetic Tree(s): OG_05_0000049_tree ,
OG_06_0000052 (SeedPlants) Phylogenetic Tree(s): OG_06_0000052_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017676001
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00225530 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 Archaeplastida
AMTR_s00056p00117010 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 Archaeplastida
AT2G37280 ATPDR5, PDR5 pleiotropic drug resistance 5 0.06 Archaeplastida
GSVIVT01017201001 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
GSVIVT01035786001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
GSVIVT01036184001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
LOC_Os01g08260.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Pp3c19_18700V3.1 No alias pleiotropic drug resistance 7 0.02 Archaeplastida
Pp3c22_9340V3.1 No alias pleiotropic drug resistance 12 0.03 Archaeplastida
Smo267739 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Smo412710 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Smo96729 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Solyc05g018510.3.1 No alias cuticular lipid exporter (PEC1). subfamily ABCG transporter 0.03 Archaeplastida
Solyc08g067620.2.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Zm00001e016714_P002 No alias cuticular lipid exporter (PEC1). subfamily ABCG transporter 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 560 771
IPR013525 ABC_2_trans 1211 1425
IPR013581 PDR_assoc 776 838
IPR003439 ABC_transporter-like 914 1066
IPR029481 ABC_trans_N 135 200
IPR003439 ABC_transporter-like 225 407
No external refs found!