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  5. AMTR_s00039p00227540

AMTR_s00039p00227540 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00039.210

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.FBX component


Gene families : OG0001044 (Archaeplastida) Phylogenetic Tree(s): OG0001044_tree ,
OG_05_0000936 (LandPlants) Phylogenetic Tree(s): OG_05_0000936_tree ,
OG_06_0000895 (SeedPlants) Phylogenetic Tree(s): OG_06_0000895_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00039p00227540
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AT1G30200 No alias F-box family protein 0.04 Archaeplastida
GSVIVT01037247001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
LOC_Os05g43490.2 No alias component FBX of SCF E3 ubiquitin ligase complex 0.02 Archaeplastida
MA_181044g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_877789g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp3g18720.1 No alias component FBX of SCF E3 ubiquitin ligase complex 0.01 Archaeplastida
Mp5g08320.1 No alias component FBX of SCF E3 ubiquitin ligase complex 0.02 Archaeplastida
Pp3c10_10820V3.1 No alias F-box family protein 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!