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  5. GSVIVT01017730001

GSVIVT01017730001


Description : Secondary metabolism.terpenoids.methylerythritol phosphate pathway.geranylgeranyl pyrophosphate synthase


Gene families : OG0000728 (Archaeplastida) Phylogenetic Tree(s): OG0000728_tree ,
OG_05_0001040 (LandPlants) Phylogenetic Tree(s): OG_05_0001040_tree ,
OG_06_0001095 (SeedPlants) Phylogenetic Tree(s): OG_06_0001095_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017730001
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00175920 evm_27.TU.AmTr_v1... Secondary metabolism.terpenoids.methylerythritol... 0.02 Archaeplastida
AT4G36810 GGPS1 geranylgeranyl pyrophosphate synthase 1 0.02 Archaeplastida
Solyc02g085700.1.1 No alias catalytic subunit of geranyl diphosphate synthase... 0.04 Archaeplastida
Zm00001e015381_P001 No alias regulatory subunit of geranyl diphosphate synthase... 0.03 Archaeplastida
Zm00001e035362_P001 No alias isoprenyl diphosphate synthase 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0008299 isoprenoid biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000092 Polyprenyl_synt 110 218
IPR000092 Polyprenyl_synt 24 100
No external refs found!