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  5. GSVIVT01017741001

GSVIVT01017741001


Description : RNA biosynthesis.transcriptional activation.NF-Y transcription factor complex.NF-YB component


Gene families : OG0000142 (Archaeplastida) Phylogenetic Tree(s): OG0000142_tree ,
OG_05_0000244 (LandPlants) Phylogenetic Tree(s): OG_05_0000244_tree ,
OG_06_0000165 (SeedPlants) Phylogenetic Tree(s): OG_06_0000165_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017741001
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01014689001 No alias RNA biosynthesis.transcriptional activation.NF-Y... 0.03 Archaeplastida
GSVIVT01014690001 No alias RNA biosynthesis.transcriptional activation.NF-Y... 0.02 Archaeplastida
GSVIVT01022214001 No alias RNA biosynthesis.transcriptional activation.NF-Y... 0.06 Archaeplastida
LOC_Os07g41580.1 No alias component NF-YB of NF-Y transcription factor complex 0.06 Archaeplastida
MA_172383g0010 No alias No annotation 0.02 Archaeplastida
Solyc01g067130.4.1 No alias component NF-YB of NF-Y transcription factor complex 0.06 Archaeplastida
Solyc04g054150.2.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc06g009010.1.1 No alias component NF-YB of NF-Y transcription factor complex 0.03 Archaeplastida
Zm00001e010728_P001 No alias component NF-YB of NF-Y transcription factor complex 0.06 Archaeplastida
Zm00001e015700_P001 No alias component NF-YB of NF-Y transcription factor complex 0.05 Archaeplastida
Zm00001e036848_P001 No alias component NF-YB of NF-Y transcription factor complex 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 22 86
No external refs found!