Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS21 component
Gene families : OG0002316 (Archaeplastida) Phylogenetic Tree(s): OG0002316_tree ,
OG_05_0003260 (LandPlants) Phylogenetic Tree(s): OG_05_0003260_tree ,
OG_06_0003911 (SeedPlants) Phylogenetic Tree(s): OG_06_0003911_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01017756001 | |
Cluster | HCCA: Cluster_69 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00045p00200410 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.13 | Archaeplastida | |
AT3G53890 | No alias | Ribosomal protein S21e | 0.2 | Archaeplastida | |
AT5G27700 | No alias | Ribosomal protein S21e | 0.15 | Archaeplastida | |
Cpa|evm.model.tig00020780.14 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.05 | Archaeplastida | |
Cre03.g203450 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.25 | Archaeplastida | |
Gb_27652 | No alias | component RPS21 of SSU proteome | 0.16 | Archaeplastida | |
Gb_35516 | No alias | component RPS21 of SSU proteome | 0.14 | Archaeplastida | |
LOC_Os03g46490.1 | No alias | component RPS21 of SSU proteome | 0.12 | Archaeplastida | |
MA_73657g0010 | No alias | component RPS21 of SSU proteome | 0.08 | Archaeplastida | |
Mp4g22150.1 | No alias | component RPS21 of SSU proteome | 0.18 | Archaeplastida | |
Pp3c12_25030V3.1 | No alias | Ribosomal protein S21e | 0.18 | Archaeplastida | |
Pp3c24_8160V3.1 | No alias | Ribosomal protein S21e | 0.04 | Archaeplastida | |
Pp3c26_3000V3.1 | No alias | Ribosomal protein S21e | 0.15 | Archaeplastida | |
Pp3c4_3220V3.1 | No alias | Ribosomal protein S21e | 0.18 | Archaeplastida | |
Smo271040 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.09 | Archaeplastida | |
Solyc01g066840.3.1 | No alias | component RPS21 of SSU proteome | 0.12 | Archaeplastida | |
Solyc04g074910.3.1 | No alias | component RPS21 of SSU proteome | 0.14 | Archaeplastida | |
Zm00001e001637_P002 | No alias | component RPS21 of SSU proteome | 0.23 | Archaeplastida | |
Zm00001e011684_P002 | No alias | component RPS21 of SSU proteome | 0.2 | Archaeplastida | |
Zm00001e031393_P002 | No alias | component RPS21 of SSU proteome | 0.08 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005622 | intracellular | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | Neighborhood |
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Neighborhood |
BP | GO:0006457 | protein folding | IEP | Neighborhood |
MF | GO:0008097 | 5S rRNA binding | IEP | Neighborhood |
MF | GO:0016859 | cis-trans isomerase activity | IEP | Neighborhood |
BP | GO:0018208 | peptidyl-proline modification | IEP | Neighborhood |
MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001931 | Ribosomal_S21e | 1 | 76 |
No external refs found! |