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  5. GSVIVT01017763001

GSVIVT01017763001


Description : Pentatricopeptide repeat-containing protein At4g15720 OS=Arabidopsis thaliana


Gene families : OG0012910 (Archaeplastida) Phylogenetic Tree(s): OG0012910_tree ,
OG_05_0012049 (LandPlants) Phylogenetic Tree(s): OG_05_0012049_tree ,
OG_06_0012871 (SeedPlants) Phylogenetic Tree(s): OG_06_0012871_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017763001
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00199190 No alias Pentatricopeptide repeat-containing protein At4g15720... 0.03 Archaeplastida
LOC_Os12g06650.1 No alias Pentatricopeptide repeat-containing protein At4g15720... 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006732 coenzyme metabolic process IEP Neighborhood
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Neighborhood
BP GO:0009108 coenzyme biosynthetic process IEP Neighborhood
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Neighborhood
BP GO:0043545 molybdopterin cofactor metabolic process IEP Neighborhood
BP GO:0051188 cofactor biosynthetic process IEP Neighborhood
BP GO:0051189 prosthetic group metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 195 219
IPR002885 Pentatricopeptide_repeat 64 90
IPR002885 Pentatricopeptide_repeat 369 389
IPR002885 Pentatricopeptide_repeat 91 138
IPR002885 Pentatricopeptide_repeat 294 341
IPR032867 DYW_dom 442 558
IPR002885 Pentatricopeptide_repeat 158 189
No external refs found!