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  5. GSVIVT01017884001

GSVIVT01017884001


No description available


Gene families : OG0000043 (Archaeplastida) Phylogenetic Tree(s): OG0000043_tree ,
OG_05_0017238 (LandPlants) Phylogenetic Tree(s): OG_05_0017238_tree ,
OG_06_0016737 (SeedPlants) Phylogenetic Tree(s): OG_06_0016737_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017884001
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00095750 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00148p00072380 evm_27.TU.AmTr_v1... 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris 0.03 Archaeplastida
AT5G19030 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Archaeplastida
AT5G50250 CP31B chloroplast RNA-binding protein 31B 0.06 Archaeplastida
Cpa|evm.model.tig00000944.16 No alias RNA-binding protein CP31B, chloroplastic OS=Arabidopsis thaliana 0.01 Archaeplastida
Gb_01461 No alias Glycine-rich RNA-binding protein 4, mitochondrial... 0.03 Archaeplastida
Gb_07052 No alias RNA editing factor (ORRM) 0.06 Archaeplastida
Gb_09687 No alias Organelle RRM domain-containing protein 6, chloroplastic... 0.02 Archaeplastida
LOC_Os07g41120.1 No alias RNA editing factor (ORRM) 0.08 Archaeplastida
LOC_Os12g31800.1 No alias RNA editing factor (ORRM) 0.08 Archaeplastida
MA_320479g0010 No alias RNA-binding protein CP29B, chloroplastic OS=Arabidopsis... 0.03 Archaeplastida
Pp3c12_9890V3.1 No alias chloroplast RNA-binding protein 29 0.02 Archaeplastida
Pp3c17_4050V3.1 No alias RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.02 Archaeplastida
Smo172546 No alias Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo81392 No alias RNA processing.organelle machineries.RNA... 0.03 Archaeplastida
Solyc01g006940.4.1 No alias 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.02 Archaeplastida
Solyc02g088790.3.1 No alias RNA editing factor (ORRM) 0.04 Archaeplastida
Zm00001e001824_P002 No alias RNA-binding protein CP29B, chloroplastic OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e005260_P002 No alias RNA chaperone (RZ1|GR-RBP) 0.04 Archaeplastida
Zm00001e010844_P001 No alias 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana... 0.03 Archaeplastida
Zm00001e011440_P001 No alias RNA chaperone (RZ1|GR-RBP) 0.08 Archaeplastida
Zm00001e035630_P001 No alias 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 66 134
No external refs found!