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  5. GSVIVT01017974001

GSVIVT01017974001


Description : Photosystem II D1 precursor processing protein PSB27-H2, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0005711 (Archaeplastida) Phylogenetic Tree(s): OG0005711_tree ,
OG_05_0005079 (LandPlants) Phylogenetic Tree(s): OG_05_0005079_tree ,
OG_06_0005326 (SeedPlants) Phylogenetic Tree(s): OG_06_0005326_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017974001
Cluster HCCA: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
AT1G05385 Psb27-H1, LPA19 photosystem II 11 kDa protein-related 0.03 Archaeplastida
Cre02.g073850 No alias No description available 0.02 Archaeplastida
LOC_Os03g53640.1 No alias Photosystem II D1 precursor processing protein PSB27-H2,... 0.1 Archaeplastida
Mp6g19720.1 No alias Photosystem II D1 precursor processing protein PSB27-H2,... 0.02 Archaeplastida
Pp3c8_18010V3.1 No alias photosystem II 11 kDa protein-related 0.05 Archaeplastida
Solyc09g076030.4.1 No alias Photosystem II D1 precursor processing protein PSB27-H2,... 0.11 Archaeplastida
Zm00001e012045_P001 No alias Photosystem II D1 precursor processing protein PSB27-H2,... 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0010207 photosystem II assembly IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
CC GO:0009512 cytochrome b6f complex IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0070069 cytochrome complex IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR025585 PSII_Pbs27 45 209
No external refs found!