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Description : Probable RNA helicase SDE3 OS=Arabidopsis thaliana
Gene families : OG0002518 (Archaeplastida) Phylogenetic Tree(s): OG0002518_tree ,
OG_05_0003674 (LandPlants) Phylogenetic Tree(s): OG_05_0003674_tree ,
OG_06_0003078 (SeedPlants) Phylogenetic Tree(s): OG_06_0003078_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01018011001 | |
| Cluster | HCCA: Cluster_100 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| LOC_Os03g06440.2 | No alias | Probable RNA helicase SDE3 OS=Arabidopsis thaliana... | 0.04 | Archaeplastida | |
| Solyc06g054020.3.1 | No alias | Probable RNA helicase SDE3 OS=Arabidopsis thaliana... | 0.08 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000148 | 1,3-beta-D-glucan synthase complex | IEP | Neighborhood |
| CC | GO:0000159 | protein phosphatase type 2A complex | IEP | Neighborhood |
| MF | GO:0003843 | 1,3-beta-D-glucan synthase activity | IEP | Neighborhood |
| MF | GO:0004476 | mannose-6-phosphate isomerase activity | IEP | Neighborhood |
| MF | GO:0004615 | phosphomannomutase activity | IEP | Neighborhood |
| MF | GO:0004668 | protein-arginine deiminase activity | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| MF | GO:0005534 | galactose binding | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| CC | GO:0005856 | cytoskeleton | IEP | Neighborhood |
| BP | GO:0006074 | (1->3)-beta-D-glucan metabolic process | IEP | Neighborhood |
| BP | GO:0006075 | (1->3)-beta-D-glucan biosynthetic process | IEP | Neighborhood |
| BP | GO:0006576 | cellular biogenic amine metabolic process | IEP | Neighborhood |
| BP | GO:0006595 | polyamine metabolic process | IEP | Neighborhood |
| BP | GO:0006596 | polyamine biosynthetic process | IEP | Neighborhood |
| BP | GO:0006694 | steroid biosynthetic process | IEP | Neighborhood |
| BP | GO:0007010 | cytoskeleton organization | IEP | Neighborhood |
| MF | GO:0008107 | galactoside 2-alpha-L-fucosyltransferase activity | IEP | Neighborhood |
| BP | GO:0008202 | steroid metabolic process | IEP | Neighborhood |
| CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | Neighborhood |
| MF | GO:0008417 | fucosyltransferase activity | IEP | Neighborhood |
| MF | GO:0008716 | D-alanine-D-alanine ligase activity | IEP | Neighborhood |
| BP | GO:0009225 | nucleotide-sugar metabolic process | IEP | Neighborhood |
| BP | GO:0009226 | nucleotide-sugar biosynthetic process | IEP | Neighborhood |
| BP | GO:0009298 | GDP-mannose biosynthetic process | IEP | Neighborhood |
| BP | GO:0009309 | amine biosynthetic process | IEP | Neighborhood |
| BP | GO:0009445 | putrescine metabolic process | IEP | Neighborhood |
| BP | GO:0009446 | putrescine biosynthetic process | IEP | Neighborhood |
| CC | GO:0016020 | membrane | IEP | Neighborhood |
| MF | GO:0016740 | transferase activity | IEP | Neighborhood |
| MF | GO:0016757 | transferase activity, transferring glycosyl groups | IEP | Neighborhood |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Neighborhood |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Neighborhood |
| MF | GO:0016813 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines | IEP | Neighborhood |
| MF | GO:0016853 | isomerase activity | IEP | Neighborhood |
| MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | Neighborhood |
| MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | Neighborhood |
| MF | GO:0016881 | acid-amino acid ligase activity | IEP | Neighborhood |
| MF | GO:0019208 | phosphatase regulator activity | IEP | Neighborhood |
| BP | GO:0019673 | GDP-mannose metabolic process | IEP | Neighborhood |
| MF | GO:0019888 | protein phosphatase regulator activity | IEP | Neighborhood |
| MF | GO:0031127 | alpha-(1,2)-fucosyltransferase activity | IEP | Neighborhood |
| BP | GO:0042401 | cellular biogenic amine biosynthetic process | IEP | Neighborhood |
| BP | GO:0042546 | cell wall biogenesis | IEP | Neighborhood |
| BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
| BP | GO:0044106 | cellular amine metabolic process | IEP | Neighborhood |
| CC | GO:0044459 | plasma membrane part | IEP | Neighborhood |
| MF | GO:0048029 | monosaccharide binding | IEP | Neighborhood |
| BP | GO:0097164 | ammonium ion metabolic process | IEP | Neighborhood |
| CC | GO:0098797 | plasma membrane protein complex | IEP | Neighborhood |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Neighborhood |
| CC | GO:1902494 | catalytic complex | IEP | Neighborhood |
| CC | GO:1903293 | phosphatase complex | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |