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  5. GSVIVT01018025001

GSVIVT01018025001


Description : Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.extensins (EXTs).glycoproteins.LRR-domain extensin


Gene families : OG0000279 (Archaeplastida) Phylogenetic Tree(s): OG0000279_tree ,
OG_05_0000206 (LandPlants) Phylogenetic Tree(s): OG_05_0000206_tree ,
OG_06_0091312 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01018025001
Cluster HCCA: Cluster_228

Target Alias Description ECC score Gene Family Method Actions
AT1G62440 LRX2 leucine-rich repeat/extensin 2 0.03 Archaeplastida
AT3G19320 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
AT3G22800 No alias Leucine-rich repeat (LRR) family protein 0.05 Archaeplastida
AT4G06744 No alias Leucine-rich repeat (LRR) family protein 0.04 Archaeplastida
GSVIVT01020574001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
Gb_12380 No alias LRR-domain extensin 0.03 Archaeplastida
LOC_Os01g41120.1 No alias LRR-domain extensin 0.03 Archaeplastida
LOC_Os03g43650.1 No alias LRR-domain extensin 0.03 Archaeplastida
LOC_Os03g58110.1 No alias LRR-domain extensin 0.06 Archaeplastida
Pp3c12_22970V3.1 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
Smo81544 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
Solyc09g082530.3.1 No alias LRR-domain extensin 0.04 Archaeplastida
Zm00001e005974_P001 No alias LRR-domain extensin 0.04 Archaeplastida
Zm00001e011874_P001 No alias LRR-domain extensin 0.04 Archaeplastida
Zm00001e026840_P001 No alias LRR-domain extensin 0.04 Archaeplastida
Zm00001e041184_P001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0030151 molybdenum ion binding IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 168 224
No external refs found!