GSVIVT01018133001


Description : Vesicle trafficking.endomembrane trafficking.PI3-kinase vesicle nucleation complex I/II.TRAF1 ATG6-stability regulator protein


Gene families : OG0001944 (Archaeplastida) Phylogenetic Tree(s): OG0001944_tree ,
OG_05_0002285 (LandPlants) Phylogenetic Tree(s): OG_05_0002285_tree ,
OG_06_0002760 (SeedPlants) Phylogenetic Tree(s): OG_06_0002760_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01018133001
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00232980 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.PI3-kinase... 0.04 Archaeplastida
Cre12.g494000 No alias Vesicle trafficking.endomembrane trafficking.PI3-kinase... 0.02 Archaeplastida
LOC_Os05g43280.1 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.07 Archaeplastida
LOC_Os12g40520.1 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.04 Archaeplastida
MA_10434493g0010 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.04 Archaeplastida
Mp8g14880.1 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.05 Archaeplastida
Pp3c12_900V3.1 No alias TRAF-like superfamily protein 0.09 Archaeplastida
Pp3c12_910V3.1 No alias TRAF-like superfamily protein 0.02 Archaeplastida
Pp3c17_710V3.1 No alias TRAF-like superfamily protein 0.05 Archaeplastida
Solyc03g005430.4.1 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.03 Archaeplastida
Zm00001e003140_P001 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.04 Archaeplastida
Zm00001e027387_P004 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.08 Archaeplastida
Zm00001e032087_P004 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.09 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009411 response to UV IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 74 191
No external refs found!