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  5. GSVIVT01018247001

GSVIVT01018247001


Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.HD-ZIP I/II transcription factor


Gene families : OG0000355 (Archaeplastida) Phylogenetic Tree(s): OG0000355_tree ,
OG_05_0000278 (LandPlants) Phylogenetic Tree(s): OG_05_0000278_tree ,
OG_06_0000297 (SeedPlants) Phylogenetic Tree(s): OG_06_0000297_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01018247001
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AT1G70920 HB18, ATHB18 homeobox-leucine zipper protein 18 0.03 Archaeplastida
AT2G22800 HAT9 Homeobox-leucine zipper protein family 0.03 Archaeplastida
Cpa|evm.model.tig00000203.28 No alias No description available 0.03 Archaeplastida
LOC_Os09g27450.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
MA_194299g0010 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
Solyc02g091930.3.1 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
Zm00001e000928_P002 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Zm00001e003763_P001 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Zm00001e007343_P003 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Zm00001e009939_P001 No alias transcription factor (HD-ZIP I/II) 0.02 Archaeplastida
Zm00001e038644_P001 No alias transcription factor (HD-ZIP I/II) 0.06 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0009496 plastoquinol--plastocyanin reductase activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
CC GO:0034357 photosynthetic membrane IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
CC GO:0042651 thylakoid membrane IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
MF GO:0052880 oxidoreductase activity, acting on diphenols and related substances as donors, with copper protein as acceptor IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 119 173
IPR003106 Leu_zip_homeo 175 208
IPR006712 HD-ZIP_N 8 92
No external refs found!