GSVIVT01018339001

Description : Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis thaliana

Gene families : OG0015440 (Archaeplastida) Phylogenetic Tree(s): OG0015440_tree ,
OG_05_0024305 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0016699 (SeedPlants) Phylogenetic Tree(s): OG_06_0016699_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01018339001
Cluster	HCCA: Cluster_211

Target	Alias	Description	ECC score	Gene Family Method	Actions
AMTR_s00159p00021150	evm_27.TU.AmTr_v1...	Pentatricopeptide repeat-containing protein At3g49170,...	0.05	Archaeplastida
Smo82351	No alias	Pentatricopeptide repeat-containing protein At1g09900...	0.01	Archaeplastida

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	506	536
IPR002885	Pentatricopeptide_repeat	439	488
IPR002885	Pentatricopeptide_repeat	89	138
IPR002885	Pentatricopeptide_repeat	369	410
IPR002885	Pentatricopeptide_repeat	264	311
IPR002885	Pentatricopeptide_repeat	159	206
IPR002885	Pentatricopeptide_repeat	57	86
IPR002885	Pentatricopeptide_repeat	338	367
IPR002885	Pentatricopeptide_repeat	239	262

External Links

No external refs found!