GSVIVT01018511001


Description : Protein trichome birefringence-like 18 OS=Arabidopsis thaliana


Gene families : OG0000288 (Archaeplastida) Phylogenetic Tree(s): OG0000288_tree ,
OG_05_0006414 (LandPlants) Phylogenetic Tree(s): OG_05_0006414_tree ,
OG_06_0005820 (SeedPlants) Phylogenetic Tree(s): OG_06_0005820_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01018511001
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00093p00042400 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 26 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT4G23790 TBL24 TRICHOME BIREFRINGENCE-LIKE 24 0.03 Archaeplastida
LOC_Os01g46400.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os06g16200.1 No alias Protein trichome birefringence-like 20 OS=Arabidopsis... 0.03 Archaeplastida
Pp3c25_3230V3.1 No alias TRICHOME BIREFRINGENCE-LIKE 25 0.02 Archaeplastida
Pp3c5_23290V3.1 No alias TRICHOME BIREFRINGENCE-LIKE 25 0.03 Archaeplastida
Pp3c5_27060V3.1 No alias TRICHOME BIREFRINGENCE-LIKE 25 0.04 Archaeplastida
Smo404468 No alias Protein trichome birefringence-like 23 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc02g089670.4.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.03 Archaeplastida
Solyc08g082060.3.1 No alias mannan O-acetyltransferase (MOAT) 0.03 Archaeplastida
Zm00001e004741_P002 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e036802_P001 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e037065_P002 No alias mannan O-acetyltransferase (MOAT) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR026057 PC-Esterase 177 470
IPR025846 PMR5_N_dom 124 176
No external refs found!