GSVIVT01018623001

Description : RNA biosynthesis.transcriptional activation.NAC transcription factor

Gene families : OG0000008 (Archaeplastida) Phylogenetic Tree(s): OG0000008_tree ,
OG_05_0000015 (LandPlants) Phylogenetic Tree(s): OG_05_0000015_tree ,
OG_06_0000168 (SeedPlants) Phylogenetic Tree(s): OG_06_0000168_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01018623001
Cluster	HCCA: Cluster_64

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00193150	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00011p00251570	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.05	Archaeplastida
AMTR_s00017p00119990	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00025p00174590	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
AMTR_s00044p00058470	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00044p00058960	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00058p00136280	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
AMTR_s00079p00099620	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.05	Archaeplastida
AMTR_s00099p00163300	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
AMTR_s00113p00077540	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
AT1G12260	EMB2749,...	NAC 007	0.04	Archaeplastida
AT1G32770	ANAC012, NST3,...	NAC domain containing protein 12	0.05	Archaeplastida
AT1G33280	BRN1, ANAC015, NAC015	NAC domain containing protein 15	0.03	Archaeplastida
AT1G52890	ANAC019, NAC019	NAC domain containing protein 19	0.04	Archaeplastida
AT1G62700	VND5, ANAC026	Arabidopsis NAC domain containing protein 26	0.05	Archaeplastida
AT1G65910	anac028, NAC028	NAC domain containing protein 28	0.05	Archaeplastida
AT1G71930	ANAC030, VND7	vascular related NAC-domain protein 7	0.04	Archaeplastida
AT2G18060	VND1, ANAC037	vascular related NAC-domain protein 1	0.03	Archaeplastida
AT2G24430	ANAC039, NAC038, ANAC038	NAC domain containing protein 38	0.06	Archaeplastida
AT2G33480	NAC041, ANAC041	NAC domain containing protein 41	0.03	Archaeplastida
AT2G46770	NST1, ANAC043, EMB2301	NAC (No Apical Meristem) domain transcriptional...	0.06	Archaeplastida
AT3G04070	anac047, NAC047	NAC domain containing protein 47	0.03	Archaeplastida
AT3G12977	No alias	NAC (No Apical Meristem) domain transcriptional...	0.04	Archaeplastida
AT3G15500	ATNAC3, ANAC055,...	NAC domain containing protein 3	0.03	Archaeplastida
AT3G61910	NST2, NAC066, ANAC066	NAC domain protein 66	0.04	Archaeplastida
AT4G10350	ANAC070, BRN2, NAC070	NAC domain containing protein 70	0.03	Archaeplastida
AT4G28530	anac074, NAC074	NAC domain containing protein 74	0.03	Archaeplastida
AT4G36160	VND2, NAC076, ANAC076	NAC domain containing protein 76	0.04	Archaeplastida
AT5G39610	NAC2, ORE1,...	NAC domain containing protein 6	0.05	Archaeplastida
AT5G39820	NAC094, anac094	NAC domain containing protein 94	0.04	Archaeplastida
AT5G62380	NAC101, VND6, ANAC101	NAC-domain protein 101	0.05	Archaeplastida
AT5G66300	NAC105, VND3, ANAC105	NAC domain containing protein 105	0.03	Archaeplastida
GSVIVT01008291001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
GSVIVT01014287001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.06	Archaeplastida
GSVIVT01018809001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
GSVIVT01019670001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01020389001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.05	Archaeplastida
GSVIVT01027431001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01035554001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.05	Archaeplastida
Gb_01126	No alias	transcription factor (NAC)	0.03	Archaeplastida
Gb_13957	No alias	transcription factor (NAC)	0.04	Archaeplastida
Gb_27819	No alias	transcription factor (KNOX). transcription factor (NAC)	0.03	Archaeplastida
Gb_35048	No alias	transcription factor (NAC)	0.03	Archaeplastida
Gb_40805	No alias	transcription factor (NAC)	0.05	Archaeplastida
Gb_41540	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os01g66490.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
LOC_Os03g21060.1	No alias	transcription factor (NAC)	0.05	Archaeplastida
LOC_Os03g60080.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os04g43560.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os05g34310.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os05g34600.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os06g23650.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os07g48450.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os07g48550.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
MA_10431189g0020	No alias	transcription factor (NAC)	0.05	Archaeplastida
MA_112054g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_23113g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_33912g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_86256g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_95225g0010	No alias	transcription factor (NAC)	0.06	Archaeplastida
Mp5g01530.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Mp6g02620.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Pp3c13_10800V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Archaeplastida
Pp3c26_13950V3.1	No alias	NAC 007	0.02	Archaeplastida
Pp3c27_7430V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Archaeplastida
Pp3c3_25610V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.04	Archaeplastida
Pp3c3_8880V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Archaeplastida
Pp3c5_570V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.05	Archaeplastida
Pp3c5_630V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Archaeplastida
Pp3c6_1310V3.1	No alias	NAC domain containing protein 70	0.03	Archaeplastida
Smo104940	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
Solyc02g036430.2.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc02g084350.3.1	No alias	transcription factor (NAC)	0.08	Archaeplastida
Solyc02g088180.3.1	No alias	transcription factor (NAC)	0.05	Archaeplastida
Solyc04g005610.3.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc06g034340.3.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc06g065410.3.1	No alias	transcription factor (NAC)	0.05	Archaeplastida
Solyc06g069100.3.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc06g069710.3.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc07g062840.3.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc07g066330.3.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc08g008660.4.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc08g079120.3.1	No alias	transcription factor (NAC)	0.06	Archaeplastida
Solyc09g025310.4.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc11g018660.2.1	No alias	transcription factor (NAC)	0.05	Archaeplastida
Solyc12g036480.2.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e001536_P002	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e003559_P003	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e005094_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e005863_P002	No alias	transcription factor (NAC)	0.05	Archaeplastida
Zm00001e007411_P001	No alias	transcription factor (NAC)	0.08	Archaeplastida
Zm00001e007905_P001	No alias	transcription factor (NAC)	0.05	Archaeplastida
Zm00001e012429_P001	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e014924_P001	No alias	transcription factor (NAC)	0.07	Archaeplastida
Zm00001e019017_P002	No alias	transcription factor (NAC)	0.06	Archaeplastida
Zm00001e021847_P002	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e021857_P001	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e022155_P001	No alias	transcription factor (NAC)	0.05	Archaeplastida
Zm00001e022817_P003	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e023108_P001	No alias	transcription factor (NAC)	0.07	Archaeplastida
Zm00001e029116_P001	No alias	transcription factor (NAC)	0.08	Archaeplastida
Zm00001e029194_P001	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e029404_P001	No alias	transcription factor (NAC)	0.06	Archaeplastida
Zm00001e029913_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e031694_P001	No alias	No annotation	0.07	Archaeplastida
Zm00001e031703_P001	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e034574_P001	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e036590_P001	No alias	transcription factor (NAC)	0.06	Archaeplastida
Zm00001e036720_P002	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e041236_P002	No alias	transcription factor (NAC)	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0001510	RNA methylation	IEP	Neighborhood
MF	GO:0004014	adenosylmethionine decarboxylase activity	IEP	Neighborhood
MF	GO:0004559	alpha-mannosidase activity	IEP	Neighborhood
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005088	Ras guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005089	Rho guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
BP	GO:0005996	monosaccharide metabolic process	IEP	Neighborhood
BP	GO:0006013	mannose metabolic process	IEP	Neighborhood
BP	GO:0006396	RNA processing	IEP	Neighborhood
BP	GO:0006397	mRNA processing	IEP	Neighborhood
BP	GO:0006400	tRNA modification	IEP	Neighborhood
BP	GO:0006508	proteolysis	IEP	Neighborhood
BP	GO:0006576	cellular biogenic amine metabolic process	IEP	Neighborhood
BP	GO:0006595	polyamine metabolic process	IEP	Neighborhood
BP	GO:0006596	polyamine biosynthetic process	IEP	Neighborhood
BP	GO:0006597	spermine biosynthetic process	IEP	Neighborhood
BP	GO:0006807	nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
MF	GO:0008173	RNA methyltransferase activity	IEP	Neighborhood
MF	GO:0008175	tRNA methyltransferase activity	IEP	Neighborhood
BP	GO:0008215	spermine metabolic process	IEP	Neighborhood
BP	GO:0008216	spermidine metabolic process	IEP	Neighborhood
MF	GO:0008233	peptidase activity	IEP	Neighborhood
MF	GO:0008234	cysteine-type peptidase activity	IEP	Neighborhood
BP	GO:0008295	spermidine biosynthetic process	IEP	Neighborhood
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	Neighborhood
BP	GO:0009308	amine metabolic process	IEP	Neighborhood
BP	GO:0009309	amine biosynthetic process	IEP	Neighborhood
BP	GO:0009451	RNA modification	IEP	Neighborhood
MF	GO:0015923	mannosidase activity	IEP	Neighborhood
BP	GO:0016071	mRNA metabolic process	IEP	Neighborhood
MF	GO:0016426	tRNA (adenine) methyltransferase activity	IEP	Neighborhood
MF	GO:0016429	tRNA (adenine-N1-)-methyltransferase activity	IEP	Neighborhood
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016831	carboxy-lyase activity	IEP	Neighborhood
MF	GO:0017016	Ras GTPase binding	IEP	Neighborhood
MF	GO:0017048	Rho GTPase binding	IEP	Neighborhood
BP	GO:0019318	hexose metabolic process	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
BP	GO:0030488	tRNA methylation	IEP	Neighborhood
MF	GO:0031267	small GTPase binding	IEP	Neighborhood
CC	GO:0031515	tRNA (m1A) methyltransferase complex	IEP	Neighborhood
BP	GO:0032259	methylation	IEP	Neighborhood
CC	GO:0034708	methyltransferase complex	IEP	Neighborhood
BP	GO:0042401	cellular biogenic amine biosynthetic process	IEP	Neighborhood
BP	GO:0043170	macromolecule metabolic process	IEP	Neighborhood
BP	GO:0043414	macromolecule methylation	IEP	Neighborhood
CC	GO:0043527	tRNA methyltransferase complex	IEP	Neighborhood
BP	GO:0044106	cellular amine metabolic process	IEP	Neighborhood
BP	GO:0044238	primary metabolic process	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood
MF	GO:0051020	GTPase binding	IEP	Neighborhood
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Neighborhood
BP	GO:0071704	organic substance metabolic process	IEP	Neighborhood
BP	GO:0097164	ammonium ion metabolic process	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Neighborhood
CC	GO:1990234	transferase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	8	135

External Links

No external refs found!

GSVIVT01018623001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation