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  5. GSVIVT01018785001

GSVIVT01018785001


Description : Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-2 cargo adaptor complex.AP2S small sigma subunit


Gene families : OG0000560 (Archaeplastida) Phylogenetic Tree(s): OG0000560_tree ,
OG_05_0005986 (LandPlants) Phylogenetic Tree(s): OG_05_0005986_tree ,
OG_06_0007683 (SeedPlants) Phylogenetic Tree(s): OG_06_0007683_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01018785001
Cluster HCCA: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
LOC_Os12g10560.1 No alias small subunit sigma of AP-2 cargo adaptor complex 0.02 Archaeplastida
Mp1g27490.1 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.02 Archaeplastida
Pp3c15_9140V3.1 No alias SNARE-like superfamily protein 0.04 Archaeplastida
Solyc11g005220.2.1 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.06 Archaeplastida
Zm00001e005895_P003 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.03 Archaeplastida
Zm00001e022339_P001 No alias small subunit sigma of AP-4 vacuole cargo adaptor complex 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Neighborhood
MF GO:0004615 phosphomannomutase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005534 galactose binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009225 nucleotide-sugar metabolic process IEP Neighborhood
BP GO:0009226 nucleotide-sugar biosynthetic process IEP Neighborhood
BP GO:0009298 GDP-mannose biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0019673 GDP-mannose metabolic process IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
MF GO:0048029 monosaccharide binding IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 32 171
No external refs found!