GSVIVT01018803001


Description : Carbohydrate metabolism.nucleotide sugar biosynthesis.GDP-L-fucose synthesis.de novo biosynthesis.GDP-D-mannose 4,6-dehydratase


Gene families : OG0004593 (Archaeplastida) Phylogenetic Tree(s): OG0004593_tree ,
OG_05_0003972 (LandPlants) Phylogenetic Tree(s): OG_05_0003972_tree ,
OG_06_0006217 (SeedPlants) Phylogenetic Tree(s): OG_06_0006217_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01018803001
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AT5G66280 GMD1 GDP-D-mannose 4,6-dehydratase 1 0.04 Archaeplastida
Gb_28531 No alias GDP-D-mannose 4,6-dehydratase (MUR1) 0.03 Archaeplastida
Pp3c14_6460V3.1 No alias GDP-D-mannose 4,6-dehydratase 1 0.02 Archaeplastida
Solyc02g084210.1.1 No alias GDP-D-mannose 4,6-dehydratase (MUR1) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0004478 methionine adenosyltransferase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016049 cell growth IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0040007 growth IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0046500 S-adenosylmethionine metabolic process IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 31 193
IPR016040 NAD(P)-bd_dom 234 265
No external refs found!