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  5. GSVIVT01018818001

GSVIVT01018818001


Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.BBX/DBB transcription factor


Gene families : OG0000461 (Archaeplastida) Phylogenetic Tree(s): OG0000461_tree ,
OG_05_0004244 (LandPlants) Phylogenetic Tree(s): OG_05_0004244_tree ,
OG_06_0005339 (SeedPlants) Phylogenetic Tree(s): OG_06_0005339_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01018818001
Cluster HCCA: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00182p00043350 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
AT1G06040 STO B-box zinc finger family protein 0.05 Archaeplastida
AT2G21320 No alias B-box zinc finger family protein 0.07 Archaeplastida
AT2G31380 STH salt tolerance homologue 0.06 Archaeplastida
LOC_Os09g35880.1 No alias transcription factor (BBX-DBB) 0.03 Archaeplastida
Pp3c17_14230V3.1 No alias light-regulated zinc finger protein 1 0.02 Archaeplastida
Pp3c7_5280V3.1 No alias B-box type zinc finger family protein 0.03 Archaeplastida
Solyc01g110370.4.1 No alias transcription factor (BBX-DBB) 0.1 Archaeplastida
Solyc02g084420.3.1 No alias transcription factor (BBX-DBB) 0.06 Archaeplastida
Solyc06g073180.3.1 No alias transcription factor (BBX-DBB) 0.06 Archaeplastida
Zm00001e010221_P001 No alias transcription factor (BBX-DBB) 0.04 Archaeplastida
Zm00001e034791_P001 No alias transcription factor (BBX-DBB) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000315 Znf_B-box 3 42
IPR000315 Znf_B-box 52 90
No external refs found!