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  5. GSVIVT01018849001

GSVIVT01018849001


Description : Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.MORC-type auxilary factor


Gene families : OG0000851 (Archaeplastida) Phylogenetic Tree(s): OG0000851_tree ,
OG_05_0000786 (LandPlants) Phylogenetic Tree(s): OG_05_0000786_tree ,
OG_06_0001754 (SeedPlants) Phylogenetic Tree(s): OG_06_0001754_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01018849001
Cluster HCCA: Cluster_220

Target Alias Description ECC score Gene Family Method Actions
AT4G36290 CRT1 compromised recognition of TCV 1 0.05 Archaeplastida
LOC_Os06g28060.1 No alias MORC-type auxiliary factor of DNA methylation pathway 0.03 Archaeplastida
LOC_Os10g10190.1 No alias MORC-type auxiliary factor of DNA methylation pathway 0.03 Archaeplastida
Mp1g01480.1 No alias MORC-type auxiliary factor of DNA methylation pathway 0.03 Archaeplastida
Pp3c23_12740V3.1 No alias Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase... 0.02 Archaeplastida
Pp3c23_6310V3.1 No alias Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase... 0.03 Archaeplastida
Zm00001e008475_P002 No alias MORC-type auxiliary factor of DNA methylation pathway 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006487 protein N-linked glycosylation IEP Neighborhood
BP GO:0007062 sister chromatid cohesion IEP Neighborhood
BP GO:0007064 mitotic sister chromatid cohesion IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
MF GO:0019905 syntaxin binding IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
MF GO:0030144 alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
MF GO:0070403 NAD+ binding IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!