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  5. GSVIVT01018923001

GSVIVT01018923001


Description : Cell wall.hemicellulose.heteromannan.modification and degradation.endo-beta-1,4-mannanase


Gene families : OG0000315 (Archaeplastida) Phylogenetic Tree(s): OG0000315_tree ,
OG_05_0000179 (LandPlants) Phylogenetic Tree(s): OG_05_0000179_tree ,
OG_06_0001045 (SeedPlants) Phylogenetic Tree(s): OG_06_0001045_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01018923001
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00070100 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.heteromannan.modification and... 0.03 Archaeplastida
GSVIVT01009746001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.03 Archaeplastida
GSVIVT01037212001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.02 Archaeplastida
Gb_04261 No alias endo-beta-1,4-mannanase 0.07 Archaeplastida
Gb_04673 No alias endo-beta-1,4-mannanase 0.04 Archaeplastida
Gb_18866 No alias endo-beta-1,4-mannanase 0.04 Archaeplastida
Gb_18867 No alias endo-beta-1,4-mannanase 0.04 Archaeplastida
Gb_23961 No alias endo-beta-1,4-mannanase 0.04 Archaeplastida
MA_38956g0010 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
MA_69814g0010 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
MA_8194133g0010 No alias Mannan endo-1,4-beta-mannosidase 2 OS=Arabidopsis... 0.03 Archaeplastida
Smo101148 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.02 Archaeplastida
Smo101525 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.03 Archaeplastida
Solyc02g084990.3.1 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
Solyc10g008300.3.1 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
Solyc10g074920.2.1 No alias endo-beta-1,4-mannanase 0.04 Archaeplastida
Zm00001e020240_P001 No alias endo-beta-1,4-mannanase 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004888 transmembrane signaling receptor activity IEP Neighborhood
MF GO:0004970 ionotropic glutamate receptor activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Neighborhood
MF GO:0008066 glutamate receptor activity IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022824 transmitter-gated ion channel activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022835 transmitter-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030594 neurotransmitter receptor activity IEP Neighborhood
MF GO:0038023 signaling receptor activity IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001547 Glyco_hydro_5 66 333
No external refs found!