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  5. GSVIVT01018939001

GSVIVT01018939001


Description : Laccase-11 OS=Arabidopsis thaliana


Gene families : OG0000114 (Archaeplastida) Phylogenetic Tree(s): OG0000114_tree ,
OG_05_0000045 (LandPlants) Phylogenetic Tree(s): OG_05_0000045_tree ,
OG_06_0000178 (SeedPlants) Phylogenetic Tree(s): OG_06_0000178_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01018939001
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00061860 evm_27.TU.AmTr_v1... Cell wall.lignin.monolignol conjugation and... 0.06 Archaeplastida
AMTR_s00012p00061910 evm_27.TU.AmTr_v1... Cell wall.lignin.monolignol conjugation and... 0.02 Archaeplastida
AMTR_s00023p00051360 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.03 Archaeplastida
AMTR_s00029p00185120 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.03 Archaeplastida
AMTR_s00045p00045490 evm_27.TU.AmTr_v1... Cell wall.lignin.monolignol conjugation and... 0.05 Archaeplastida
AMTR_s00055p00189700 evm_27.TU.AmTr_v1... Cell wall.lignin.monolignol conjugation and... 0.03 Archaeplastida
AMTR_s00055p00190270 evm_27.TU.AmTr_v1... Cell wall.lignin.monolignol conjugation and... 0.04 Archaeplastida
AT2G29130 ATLAC2, LAC2 laccase 2 0.08 Archaeplastida
AT2G38080 LAC4, IRX12,... Laccase/Diphenol oxidase family protein 0.08 Archaeplastida
AT2G40370 LAC5 laccase 5 0.03 Archaeplastida
AT3G09220 LAC7 laccase 7 0.07 Archaeplastida
AT5G01190 LAC10 laccase 10 0.08 Archaeplastida
AT5G03260 LAC11 laccase 11 0.03 Archaeplastida
AT5G05390 LAC12 laccase 12 0.08 Archaeplastida
AT5G60020 ATLAC17, LAC17 laccase 17 0.08 Archaeplastida
GSVIVT01012343001 No alias Laccase-14 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01016513001 No alias Cell wall.lignin.monolignol conjugation and... 0.06 Archaeplastida
GSVIVT01024795001 No alias Cell wall.lignin.monolignol conjugation and... 0.06 Archaeplastida
GSVIVT01025046001 No alias Cell wall.lignin.monolignol conjugation and... 0.05 Archaeplastida
GSVIVT01032744001 No alias Laccase-12 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01033501001 No alias Laccase-11 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01034003001 No alias Cell wall.lignin.monolignol conjugation and... 0.06 Archaeplastida
GSVIVT01034040001 No alias Laccase-7 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01034137001 No alias Cell wall.lignin.monolignol conjugation and... 0.06 Archaeplastida
GSVIVT01034138001 No alias Cell wall.lignin.monolignol conjugation and... 0.05 Archaeplastida
GSVIVT01034139001 No alias Cell wall.lignin.monolignol conjugation and... 0.06 Archaeplastida
GSVIVT01034146001 No alias Cell wall.lignin.monolignol conjugation and... 0.03 Archaeplastida
Gb_00462 No alias lignin laccase 0.04 Archaeplastida
Gb_11065 No alias Laccase-11 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_14613 No alias lignin laccase 0.04 Archaeplastida
Gb_14614 No alias Laccase-4 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Gb_23947 No alias Laccase-1 OS=Arabidopsis thaliana (sp|q9lms3|lac1_arath... 0.07 Archaeplastida
Gb_33400 No alias Laccase-3 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Gb_34469 No alias Laccase-12 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g61160.1 No alias Laccase-3 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os01g62600.1 No alias Putative laccase-5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os03g16610.1 No alias lignin laccase 0.03 Archaeplastida
LOC_Os05g38420.1 No alias lignin laccase 0.05 Archaeplastida
LOC_Os11g48060.1 No alias lignin laccase 0.03 Archaeplastida
MA_10191230g0010 No alias No annotation 0.02 Archaeplastida
MA_10427033g0010 No alias Laccase-12 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10430789g0010 No alias Putative laccase-5 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
MA_10434084g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10434864g0010 No alias Laccase-12 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_115430g0010 No alias Laccase-17 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_118833g0010 No alias lignin laccase 0.04 Archaeplastida
MA_122769g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_132857g0010 No alias Laccase-12 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_14240g0010 No alias Laccase-4 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_170004g0010 No alias Laccase-12 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_186173g0010 No alias Laccase-12 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_19643g0010 No alias Laccase-12 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_205016g0010 No alias Laccase-4 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_28768g0010 No alias Laccase-4 OS=Arabidopsis thaliana (sp|o80434|lac4_arath... 0.04 Archaeplastida
MA_33288g0010 No alias Laccase-12 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_414479g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_488981g0010 No alias Laccase-13 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_66348g0010 No alias Laccase-12 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_7035458g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_75861g0010 No alias Laccase-1 OS=Arabidopsis thaliana (sp|q9lms3|lac1_arath... 0.02 Archaeplastida
MA_812936g0010 No alias Laccase-12 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_9916300g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp3g20310.1 No alias Laccase-2 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
Pp3c6_3290V3.1 No alias laccase 2 0.03 Archaeplastida
Smo105894 No alias Laccase-4 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
Smo78002 No alias Laccase-4 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
Solyc02g085110.4.1 No alias Laccase-11 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc02g085120.3.1 No alias Laccase-11 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc04g072280.3.1 No alias Laccase-14 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc05g050540.4.1 No alias Laccase-6 OS=Arabidopsis thaliana (sp|q9zpy2|lac6_arath... 0.05 Archaeplastida
Solyc05g052340.4.1 No alias Laccase-5 OS=Arabidopsis thaliana (sp|q9siy8|lac5_arath... 0.04 Archaeplastida
Solyc05g052370.3.1 No alias Laccase-12 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc05g052400.3.1 No alias Laccase-12 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc06g048860.3.1 No alias Laccase-5 OS=Arabidopsis thaliana (sp|q9siy8|lac5_arath... 0.05 Archaeplastida
Solyc06g050530.3.1 No alias Laccase-12 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc06g076330.3.1 No alias lignin laccase 0.05 Archaeplastida
Solyc07g049460.3.1 No alias Laccase-7 OS=Arabidopsis thaliana (sp|q9sr40|lac7_arath... 0.05 Archaeplastida
Solyc09g010990.3.1 No alias lignin laccase 0.03 Archaeplastida
Solyc09g010995.1.1 No alias lignin laccase 0.04 Archaeplastida
Solyc09g011960.2.1 No alias lignin laccase 0.04 Archaeplastida
Solyc09g011970.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc09g014240.4.1 No alias lignin laccase 0.05 Archaeplastida
Solyc09g150105.1.1 No alias lignin laccase 0.03 Archaeplastida
Solyc10g076830.2.1 No alias lignin laccase 0.04 Archaeplastida
Solyc10g085090.3.1 No alias No annotation 0.03 Archaeplastida
Solyc12g056820.2.1 No alias Laccase-15 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e001209_P001 No alias lignin laccase 0.03 Archaeplastida
Zm00001e001354_P001 No alias Laccase-3 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
Zm00001e015854_P001 No alias Putative laccase-9 OS=Oryza sativa subsp. japonica... 0.07 Archaeplastida
Zm00001e019303_P001 No alias lignin laccase 0.05 Archaeplastida
Zm00001e019316_P001 No alias lignin laccase 0.04 Archaeplastida
Zm00001e019412_P001 No alias Laccase-3 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e021354_P001 No alias Laccase-25 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e023886_P001 No alias Putative laccase-9 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e023953_P001 No alias Laccase-23 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
Zm00001e028767_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e028830_P002 No alias Laccase-3 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e031826_P001 No alias lignin laccase 0.05 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011707 Cu-oxidase_3 17 130
IPR011706 Cu-oxidase_2 393 525
IPR001117 Cu-oxidase 144 292
No external refs found!