GSVIVT01018945001

Description : Cell division control protein 48 homolog D OS=Arabidopsis thaliana

Gene families : OG0002755 (Archaeplastida) Phylogenetic Tree(s): OG0002755_tree ,
OG_05_0002363 (LandPlants) Phylogenetic Tree(s): OG_05_0002363_tree ,
OG_06_0002373 (SeedPlants) Phylogenetic Tree(s): OG_06_0002373_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01018945001
Cluster	HCCA: Cluster_197

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00011p00246950	evm_27.TU.AmTr_v1...	Cell division control protein 48 homolog D...	0.04	Archaeplastida
AT2G18330	No alias	AAA-type ATPase family protein	0.06	Archaeplastida
AT3G03060	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.09	Archaeplastida
AT4G36580	No alias	AAA-type ATPase family protein	0.04	Archaeplastida
AT5G16930	No alias	AAA-type ATPase family protein	0.1	Archaeplastida
Gb_39829	No alias	no hits & (original description: none)	0.05	Archaeplastida
LOC_Os02g46990.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_24945g0010	No alias	no hits & (original description: none)	0.05	Archaeplastida
Mp3g01020.1	No alias	no hits & (original description: none)	0.11	Archaeplastida
Pp3c16_10340V3.1	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.02	Archaeplastida
Pp3c5_16820V3.1	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.13	Archaeplastida
Smo168159	No alias	26S proteasome regulatory subunit 6B homolog...	0.07	Archaeplastida
Solyc02g062700.3.1	No alias	Cell division control protein 48 homolog D...	0.07	Archaeplastida
Solyc03g097020.4.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e015525_P002	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e015589_P001	No alias	no hits & (original description: none)	0.08	Archaeplastida
Zm00001e023292_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e023330_P001	No alias	no hits & (original description: none)	0.1	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001510	RNA methylation	IEP	Neighborhood
MF	GO:0001882	nucleoside binding	IEP	Neighborhood
MF	GO:0001883	purine nucleoside binding	IEP	Neighborhood
MF	GO:0004177	aminopeptidase activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
MF	GO:0005525	GTP binding	IEP	Neighborhood
BP	GO:0006396	RNA processing	IEP	Neighborhood
BP	GO:0006400	tRNA modification	IEP	Neighborhood
BP	GO:0006412	translation	IEP	Neighborhood
BP	GO:0006518	peptide metabolic process	IEP	Neighborhood
MF	GO:0008168	methyltransferase activity	IEP	Neighborhood
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Neighborhood
MF	GO:0019001	guanyl nucleotide binding	IEP	Neighborhood
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Neighborhood
MF	GO:0030145	manganese ion binding	IEP	Neighborhood
BP	GO:0030488	tRNA methylation	IEP	Neighborhood
CC	GO:0031515	tRNA (m1A) methyltransferase complex	IEP	Neighborhood
BP	GO:0032259	methylation	IEP	Neighborhood
MF	GO:0032549	ribonucleoside binding	IEP	Neighborhood
MF	GO:0032550	purine ribonucleoside binding	IEP	Neighborhood
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Neighborhood
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Neighborhood
CC	GO:0034708	methyltransferase complex	IEP	Neighborhood
BP	GO:0042254	ribosome biogenesis	IEP	Neighborhood
BP	GO:0043043	peptide biosynthetic process	IEP	Neighborhood
BP	GO:0043414	macromolecule methylation	IEP	Neighborhood
CC	GO:0043527	tRNA methyltransferase complex	IEP	Neighborhood
BP	GO:0043604	amide biosynthetic process	IEP	Neighborhood
BP	GO:0044085	cellular component biogenesis	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	409	536
IPR021911	DUF3523	70	337

External Links

No external refs found!

GSVIVT01018945001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation