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Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.zf-HD transcription factor
Gene families : OG0000209 (Archaeplastida) Phylogenetic Tree(s): OG0000209_tree ,
OG_05_0000122 (LandPlants) Phylogenetic Tree(s): OG_05_0000122_tree ,
OG_06_0000088 (SeedPlants) Phylogenetic Tree(s): OG_06_0000088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01018947001 | |
| Cluster | HCCA: Cluster_219 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G14440 | AtHB31, ZHD4, HB31 | homeobox protein 31 | 0.11 | Archaeplastida | |
| AT1G14687 | AtHB32, HB32, ZHD14 | homeobox protein 32 | 0.05 | Archaeplastida | |
| AT1G75240 | AtHB33, ZHD5, HB33 | homeobox protein 33 | 0.06 | Archaeplastida | |
| AT2G02540 | ZHD3, HB21, ATHB21, ZFHD4 | homeobox protein 21 | 0.1 | Archaeplastida | |
| AT5G65410 | ZHD1, ZFHD2, HB25, ATHB25 | homeobox protein 25 | 0.03 | Archaeplastida | |
| Gb_15163 | No alias | transcription factor (zf-HD) | 0.03 | Archaeplastida | |
| Gb_37393 | No alias | transcription factor (zf-HD) | 0.03 | Archaeplastida | |
| MA_101972g0010 | No alias | transcription factor (zf-HD) | 0.03 | Archaeplastida | |
| Pp3c18_12880V3.1 | No alias | homeobox protein 31 | 0.05 | Archaeplastida | |
| Pp3c7_15000V3.1 | No alias | homeobox protein 33 | 0.03 | Archaeplastida | |
| Solyc04g074990.3.1 | No alias | transcription factor (zf-HD) | 0.03 | Archaeplastida | |
| Solyc04g080490.4.1 | No alias | transcription factor (zf-HD) | 0.06 | Archaeplastida | |
| Zm00001e008082_P001 | No alias | transcription factor (zf-HD) | 0.02 | Archaeplastida | |
| Zm00001e009830_P001 | No alias | transcription factor (zf-HD) | 0.04 | Archaeplastida | |
| Zm00001e018364_P001 | No alias | transcription factor (zf-HD) | 0.02 | Archaeplastida | |
| Zm00001e022486_P001 | No alias | transcription factor (zf-HD) | 0.03 | Archaeplastida | |
| Zm00001e023331_P001 | No alias | transcription factor (zf-HD) | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003690 | double-stranded DNA binding | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| MF | GO:0008483 | transaminase activity | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| MF | GO:0030599 | pectinesterase activity | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| MF | GO:0042393 | histone binding | IEP | Neighborhood |
| BP | GO:0042545 | cell wall modification | IEP | Neighborhood |
| BP | GO:0045229 | external encapsulating structure organization | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | Neighborhood |
| BP | GO:0071555 | cell wall organization | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006456 | ZF_HD_homeobox_Cys/His_dimer | 89 | 141 |
| No external refs found! |