Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor
Gene families : OG0000200 (Archaeplastida) Phylogenetic Tree(s): OG0000200_tree ,
OG_05_0000106 (LandPlants) Phylogenetic Tree(s): OG_05_0000106_tree ,
OG_06_0000058 (SeedPlants) Phylogenetic Tree(s): OG_06_0000058_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01019000001 | |
Cluster | HCCA: Cluster_144 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G68130 | IDD14, AtIDD14 | indeterminate(ID)-domain 14 | 0.05 | Archaeplastida | |
AT3G13810 | IDD11, AtIDD11 | indeterminate(ID)-domain 11 | 0.06 | Archaeplastida | |
GSVIVT01010961001 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.03 | Archaeplastida | |
LOC_Os03g10140.1 | No alias | C2H2 zinc finger transcription factor. elicitor peptide... | 0.04 | Archaeplastida | |
Solyc01g099340.3.1 | No alias | C2H2 zinc finger transcription factor | 0.05 | Archaeplastida | |
Solyc02g062940.3.1 | No alias | C2H2 zinc finger transcription factor | 0.03 | Archaeplastida | |
Zm00001e026143_P001 | No alias | C2H2 zinc finger transcription factor | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000272 | polysaccharide catabolic process | IEP | Neighborhood |
CC | GO:0000786 | nucleosome | IEP | Neighborhood |
MF | GO:0003677 | DNA binding | IEP | Neighborhood |
MF | GO:0004806 | triglyceride lipase activity | IEP | Neighborhood |
BP | GO:0006325 | chromatin organization | IEP | Neighborhood |
BP | GO:0006334 | nucleosome assembly | IEP | Neighborhood |
MF | GO:0008134 | transcription factor binding | IEP | Neighborhood |
MF | GO:0016160 | amylase activity | IEP | Neighborhood |
MF | GO:0016161 | beta-amylase activity | IEP | Neighborhood |
MF | GO:0016298 | lipase activity | IEP | Neighborhood |
MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | Neighborhood |
MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | Neighborhood |
MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
MF | GO:0017025 | TBP-class protein binding | IEP | Neighborhood |
CC | GO:0032993 | protein-DNA complex | IEP | Neighborhood |
BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Neighborhood |
BP | GO:0034728 | nucleosome organization | IEP | Neighborhood |
CC | GO:0044815 | DNA packaging complex | IEP | Neighborhood |
MF | GO:0051213 | dioxygenase activity | IEP | Neighborhood |
BP | GO:0065004 | protein-DNA complex assembly | IEP | Neighborhood |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR013087 | Znf_C2H2_type | 66 | 88 |
No external refs found! |