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  5. GSVIVT01019035001

GSVIVT01019035001


Description : Probable calcium-binding protein CML41 OS=Arabidopsis thaliana


Gene families : OG0002822 (Archaeplastida) Phylogenetic Tree(s): OG0002822_tree ,
OG_05_0001661 (LandPlants) Phylogenetic Tree(s): OG_05_0001661_tree ,
OG_06_0000816 (SeedPlants) Phylogenetic Tree(s): OG_06_0000816_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01019035001
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00067280 evm_27.TU.AmTr_v1... Putative calcium-binding protein CML19 OS=Oryza sativa... 0.03 Archaeplastida
AT3G01830 No alias Calcium-binding EF-hand family protein 0.04 Archaeplastida
GSVIVT01010385001 No alias Putative calcium-binding protein CML19 OS=Oryza sativa... 0.03 Archaeplastida
Gb_13855 No alias Probable calcium-binding protein CML41 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os01g72540.1 No alias Putative calcium-binding protein CML23 OS=Oryza sativa... 0.04 Archaeplastida
LOC_Os01g72550.1 No alias Putative calcium-binding protein CML19 OS=Oryza sativa... 0.02 Archaeplastida
LOC_Os11g01390.1 No alias Probable calcium-binding protein CML25/26 OS=Oryza... 0.02 Archaeplastida
Solyc03g005040.1.1 No alias Probable calcium-binding protein CML31 OS=Oryza sativa... 0.03 Archaeplastida
Solyc06g073830.1.1 No alias Putative calcium-binding protein CML19 OS=Oryza sativa... 0.05 Archaeplastida
Solyc11g071740.2.1 No alias Calcium-binding protein CML38 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc11g071750.2.1 No alias Calcium-binding protein CML37 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc11g071760.3.1 No alias Calcium-binding protein CML38 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e028302_P001 No alias Putative calcium-binding protein CML19 OS=Oryza sativa... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 136 179
IPR002048 EF_hand_dom 51 114
No external refs found!