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  5. GSVIVT01019040001

GSVIVT01019040001


Description : Pentatricopeptide repeat-containing protein At5g66631 OS=Arabidopsis thaliana


Gene families : OG0005160 (Archaeplastida) Phylogenetic Tree(s): OG0005160_tree ,
OG_05_0003716 (LandPlants) Phylogenetic Tree(s): OG_05_0003716_tree ,
OG_06_0009734 (SeedPlants) Phylogenetic Tree(s): OG_06_0009734_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01019040001
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Gb_36347 No alias Pentatricopeptide repeat-containing protein At5g66631... 0.04 Archaeplastida
MA_77707g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.17 Archaeplastida
MA_89328g0010 No alias Pentatricopeptide repeat-containing protein At5g66631... 0.03 Archaeplastida
Pp3c4_14140V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Archaeplastida
Solyc02g065510.1.1 No alias Pentatricopeptide repeat-containing protein At5g66631... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 172 217
IPR002885 Pentatricopeptide_repeat 523 570
IPR002885 Pentatricopeptide_repeat 458 482
No external refs found!