1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01019353001

GSVIVT01019353001


Description : Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana


Gene families : OG0000117 (Archaeplastida) Phylogenetic Tree(s): OG0000117_tree ,
OG_05_0004425 (LandPlants) Phylogenetic Tree(s): OG_05_0004425_tree ,
OG_06_0004643 (SeedPlants) Phylogenetic Tree(s): OG_06_0004643_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01019353001
Cluster HCCA: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00139470 evm_27.TU.AmTr_v1... F-box protein At2g02240 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT2G02250 AtPP2-B2, PP2-B2 phloem protein 2-B2 0.03 Archaeplastida
LOC_Os02g56800.1 No alias Putative F-box protein PP2-B2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os02g56820.1 No alias F-box protein At2g02240 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os03g02550.1 No alias component FBX of SCF E3 ubiquitin ligase complex 0.03 Archaeplastida
LOC_Os09g35680.1 No alias component FBX of SCF E3 ubiquitin ligase complex 0.03 Archaeplastida
LOC_Os12g03740.1 No alias F-box protein PP2-B10 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_134768g0010 No alias F-box protein PP2-B11 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc01g099990.3.1 No alias F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc04g056710.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc12g098190.2.1 No alias F-box protein PP2-B10 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e004639_P002 No alias F-box protein PP2-B10 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e034748_P001 No alias component FBX of SCF E3 ubiquitin ligase complex 0.05 Archaeplastida
Zm00001e041427_P001 No alias component FBX of SCF E3 ubiquitin ligase complex 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005488 binding IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008198 ferrous iron binding IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
InterPro domains Description Start Stop
IPR025886 PP2-like 32 179
No external refs found!