1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01019372001

GSVIVT01019372001


Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase membrane association.RAB-GTPase geranylgeranyltransferase (RGT) complex.beta subunit


Gene families : OG0004207 (Archaeplastida) Phylogenetic Tree(s): OG0004207_tree ,
OG_05_0003814 (LandPlants) Phylogenetic Tree(s): OG_05_0003814_tree ,
OG_06_0003993 (SeedPlants) Phylogenetic Tree(s): OG_06_0003993_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01019372001
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AT5G12210 RGTB1, AtRGTB1 RAB geranylgeranyl transferase beta subunit 1 0.05 Archaeplastida
MA_121247g0010 No alias No annotation 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001330 PFTB_repeat 152 195
IPR001330 PFTB_repeat 248 289
IPR001330 PFTB_repeat 105 146
IPR001330 PFTB_repeat 57 97
IPR001330 PFTB_repeat 201 243
No external refs found!